RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 MKNK1Q9BUB5 465 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 SMYD3Q9H7B4 428 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 GREB1Q4ZG55 1949 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 CEP295Q9C0D2 2601 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 TM4SF5O14894 197 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 KCNK5O95279 499 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 F11P03951 625 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 GRIK1P39086 918 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 MPLP40238 635 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 PRCPP42785 496 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 MAGEA11P43364 429 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 CDH8P55286 799 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 NLRP12P59046 1061 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 SHC2P98077 582 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 COL9A2Q14055 689 aaPredicted RBP18.67■□□□□ 0.58
FAM3A-216ENST00000449971 C1orf220Q5T0J3 134 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 SCARA5Q6ZMJ2 495 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 INTS8Q75QN2 995 aaKnown RBP18.67■□□□□ 0.58
FAM3A-216ENST00000449971 MYCBPAPQ8TBZ2 947 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 BPIFB1Q8TDL5 484 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 EEF2KMTQ96G04 330 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 HHIPQ96QV1 700 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 SLC46A2Q9BY10 475 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 DPEP3Q9H4B8 488 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 VRTNQ9H8Y1 702 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 NME7Q9Y5B8 376 aa18.67■□□□□ 0.58
FAM3A-216ENST00000449971 FAM208BQ5VWN6 2430 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 BAHCC1Q9P281 2608 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 C1QTNF9BB2RNN3 333 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 CETN3O15182 167 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 GADD45BO75293 160 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-216ENST00000449971 C1QTNF9P0C862 333 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 TRIM49P0CI25 452 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 TRIM49CP0CI26 452 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 P4HA1P13674 534 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 PIK3CAP42336 1068 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 RAP1GAPP47736 663 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 GCLMP48507 274 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 EDRF1Q3B7T1 1238 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 ITPRIPL2Q3MIP1 535 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 ZCWPW2Q504Y3 356 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 ISM2Q6H9L7 571 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 VSTM1Q6UX27 236 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 TMEM150AQ86TG1 271 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 MRPS31Q92665 395 aaKnown RBP18.66■□□□□ 0.58
FAM3A-216ENST00000449971 PCED1BQ96HM7 432 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 LOXL4Q96JB6 756 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 TSG101Q99816 390 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 MMRN2Q9H8L6 949 aa18.66■□□□□ 0.58
FAM3A-216ENST00000449971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.66■□□□□ 0.582e-11■■■■■ 173.1
FAM3A-216ENST00000449971 UXTQ9UBK9 157 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-216ENST00000449971 KIF26AQ9ULI4 1882 aaPredicted RBP18.66■□□□□ 0.58
FAM3A-216ENST00000449971 ATRXP46100 2492 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 NOL4O94818 638 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 HLA-DRAP01903 254 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 PROS1P07225 676 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 SPINK2P20155 84 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 ANXA13P27216 316 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 HOXA6P31267 233 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 NOVA1P51513 510 aaKnown RBP18.65■□□□□ 0.58
FAM3A-216ENST00000449971 GRSF1Q12849 480 aaKnown RBP eCLIP18.65■□□□□ 0.58
FAM3A-216ENST00000449971 FOXC1Q12948 553 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 TRIM68Q6AZZ1 485 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 SYNPOQ8N3V7 929 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 MAB21L3Q8N8X9 362 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 TTC16Q8NEE8 873 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 SPATA20Q8TB22 786 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 TAF4BQ92750 862 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 EDEM2Q9BV94 578 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 LSM14BQ9BX40 385 aaKnown RBP18.65■□□□□ 0.58
FAM3A-216ENST00000449971 GTPBP4Q9BZE4 634 aaKnown RBP18.65■□□□□ 0.58
FAM3A-216ENST00000449971 GKN1Q9NS71 199 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 THG1LQ9NWX6 298 aaKnown RBP18.65■□□□□ 0.58
FAM3A-216ENST00000449971 CHMP5Q9NZZ3 219 aa18.65■□□□□ 0.58
FAM3A-216ENST00000449971 GIPC1O14908 333 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 PLCB2Q00722 1185 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 CREB5Q02930 508 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 PPP3CAQ08209 521 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 TXNDC8Q6A555 127 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 ANKRD40Q6AI12 368 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 SPOPLQ6IQ16 392 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 FSTL4Q6MZW2 842 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 ELOA2Q8IYF1 753 aaPredicted RBP18.64■□□□□ 0.57
FAM3A-216ENST00000449971 CMTM8Q8IZV2 173 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 B3GALNT2Q8NCR0 500 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 TRMT2BQ96GJ1 504 aaKnown RBP18.64■□□□□ 0.57
FAM3A-216ENST00000449971 SDCBP2Q9H190 292 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 EBF3Q9H4W6 596 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 ZMYM5Q9UJ78 669 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 ZMIZ1Q9ULJ6 1067 aa18.64■□□□□ 0.57
FAM3A-216ENST00000449971 CLDN5O00501 218 aa18.63■□□□□ 0.57
FAM3A-216ENST00000449971 TRIM66O15016 1216 aa18.63■□□□□ 0.57
FAM3A-216ENST00000449971 DCLK1O15075 740 aa18.63■□□□□ 0.57
FAM3A-216ENST00000449971 RNF40O75150 1001 aa18.63■□□□□ 0.57
FAM3A-216ENST00000449971 ASS1P00966 412 aaKnown RBP18.63■□□□□ 0.57
FAM3A-216ENST00000449971 EGFP01133 1207 aa18.63■□□□□ 0.57
FAM3A-216ENST00000449971 EPB41P11171 864 aaKnown RBP18.63■□□□□ 0.57
FAM3A-216ENST00000449971 DDX6P26196 483 aaKnown RBP eCLIP18.63■□□□□ 0.57
FAM3A-216ENST00000449971 WEE1P30291 646 aa18.63■□□□□ 0.57
FAM3A-216ENST00000449971 AVPR1AP37288 418 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms