RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CCDC195A0A1B0GUA6 201 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 NTHL1P78549 312 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 TWF1Q12792 350 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 MTMR3Q13615 1198 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 SPATA2LQ8IUW3 424 aaPredicted RBP10.42□□□□□ -0.74
CCDC171-203ENST00000449575 VSTM4Q8IW00 320 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 ZMIZ2Q8NF64 920 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 GIPC2Q8TF65 315 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 TNIP3Q96KP6 325 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 YIPF1Q9Y548 306 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 PCDHB5Q9Y5E4 795 aa10.42□□□□□ -0.74
CCDC171-203ENST00000449575 F8VZ95 297 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 ZMYND10O75800 440 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 HAPLN1P10915 354 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-203ENST00000449575 CD19P15391 556 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 JAM2P57087 298 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 FAM35AQ86V20 835 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 SLC47A2Q86VL8 602 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 CASP10Q92851 521 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 BAG1Q99933 345 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-203ENST00000449575 OXCT2Q9BYC2 517 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-203ENST00000449575 TTYH3Q9C0H2 523 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 S1PR5Q9H228 398 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 VIPAS39Q9H9C1 493 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 A0A1W2PQC6 194 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 F8VP50 259 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 FANCGO15287 622 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 ELF1P32519 619 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 GOLGA8FQ08AF8 430 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 GOLGA8DPQ0D2H9 430 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 NFE2Q16621 373 aaPredicted RBP10.41□□□□□ -0.74
CCDC171-203ENST00000449575 CFAP221Q4G0U5 840 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 LIN9Q5TKA1 542 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 TTC30AQ86WT1 665 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 SCN4BQ8IWT1 228 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 CPLX3Q8WVH0 158 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 BAP1Q92560 729 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 JAKMIP2Q96AA8 810 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 SMOQ99835 787 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 MED10Q9BTT4 135 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 PLEKHA4Q9H4M7 779 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
CCDC171-203ENST00000449575 GFPT2O94808 682 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 MCM3P25205 808 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 MNAT1P51948 309 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 SATB1Q01826 763 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 PPM1LQ5SGD2 360 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 ENOSF1Q7L5Y1 443 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 UBA3Q8TBC4 463 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 SPPL2BQ8TCT7 592 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 HLA-CQ95604 372 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 WDR24Q96S15 920 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 STK33Q9BYT3 514 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 SUFUQ9UMX1 484 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 O00370 1275 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 TRIM21P19474 475 aaKnown RBP10.4□□□□□ -0.74
CCDC171-203ENST00000449575 CALRP27797 417 aaKnown RBP10.4□□□□□ -0.74
CCDC171-203ENST00000449575 GRIK1P39086 918 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 MAP3K7CLP57077 242 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 USP46P62068 366 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 ARID5AQ03989 594 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 CASP8Q14790 479 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 POTEHQ6S545 545 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 CLEC20AQ6ZU45 233 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 SMRP1Q8NCR6 262 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.4□□□□□ -0.74
CCDC171-203ENST00000449575 HNRNPABQ99729 332 aaKnown RBP10.4□□□□□ -0.74
CCDC171-203ENST00000449575 DNMT3BQ9UBC3 853 aaKnown RBP10.4□□□□□ -0.74
CCDC171-203ENST00000449575 CDC23Q9UJX2 597 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 TSPAN16Q9UKR8 245 aa10.4□□□□□ -0.74
CCDC171-203ENST00000449575 AP1G2O75843 785 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 GYPCP04921 128 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 KCNQ1P51787 676 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 YWHAEP62258 255 aaKnown RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 GOLGA7BQ2TAP0 167 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 C4orf50Q6ZRC1 276 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 GRASPQ7Z6J2 395 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 ZNF606Q8WXB4 792 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 PRKD2Q9BZL6 878 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 ANKZF1Q9H8Y5 726 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SFXN1Q9H9B4 322 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 ZNF334Q9HCZ1 680 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 LRRC53A6NM62 1247 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 LRG1P02750 347 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 PAEPP09466 180 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 VDRP11473 427 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 GJA1P17302 382 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SP100P23497 879 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 GNA15P30679 374 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 CCR2P41597 374 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 IFRD2Q12894 506 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 MAPRE1Q15691 268 aaKnown RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SLC5A9Q2M3M2 681 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SGO2Q562F6 1265 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 CCDC149Q6ZUS6 474 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms