RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 TDRKHQ9Y2W6 561 aaKnown RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 E7ENQ6 273 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 CYP1A2P05177 515 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ADARP55265 1226 aaKnown RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 CYP24A1Q07973 514 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ITKQ08881 620 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PDK3Q15120 406 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 LIN52Q52LA3 116 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 TNS4Q8IZW8 715 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ABRAQ8N0Z2 381 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 CMTM5Q96DZ9 223 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 TBC1D22BQ9NU19 505 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 USP12O75317 370 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PEX2P28328 305 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 AVPR1AP37288 418 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ETFBP38117 255 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 SPP2Q13103 211 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 Q4G0T1 1027 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 CCDC138Q96M89 665 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 DDX56Q9NY93 547 aaKnown RBP12.88□□□□□ -0.35
UBE3B-204ENST00000449510 PRKAG3Q9UGI9 489 aa12.88□□□□□ -0.35
UBE3B-204ENST00000449510 MYH7P12883 1935 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
UBE3B-204ENST00000449510 PSAPP07602 524 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 VAV1P15498 845 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 SDC4P31431 198 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 KIF19Q2TAC6 998 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 ZNF568Q3ZCX4 644 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 MCPH1Q8NEM0 835 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 IL31RAQ8NI17 732 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 ADAM32Q8TC27 787 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 C10orf82Q8WW14 230 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 CYGBQ8WWM9 190 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 SEC14L1Q92503 715 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 EBF4Q9BQW3 602 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 ZMYM2Q9UBW7 1377 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 P4HA2O15460 535 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 ARL4AP40617 200 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 GTF2A2P52657 109 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 TRIM72Q6ZMU5 477 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 SLC7A6OSQ96CW6 309 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-204ENST00000449510 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 PTPRHQ9HD43 1115 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 TNS2Q63HR2 1409 aa12.87□□□□□ -0.35
UBE3B-204ENST00000449510 A0A0B4J269 797 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 TM9SF1O15321 606 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 EEF1DP29692 281 aaKnown RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 ACTR2P61160 394 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 NME3Q13232 169 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 CNPY1Q3B7I2 92 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PHACTR1Q9C0D0 580 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 KLHL2O95198 593 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 TBXAS1P24557 533 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PLIN5Q00G26 463 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 AMHR2Q16671 573 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 ACAD11Q709F0 780 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 DTNBP1Q96EV8 351 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 APOPT1Q96IL0 206 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 TSR3Q9UJK0 312 aaKnown RBP12.86□□□□□ -0.35
UBE3B-204ENST00000449510 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms