RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SPATA17Q96L03 361 aa14.81□□□□□ -0.04
SHMT2-203ENST00000449049 SEPT5Q99719 369 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-203ENST00000449049 ZNF576Q9H609 170 aa14.81□□□□□ -0.04
SHMT2-203ENST00000449049 AVENQ9NQS1 362 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-203ENST00000449049 FBXW11Q9UKB1 542 aa14.81□□□□□ -0.04
SHMT2-203ENST00000449049 TCRBV5S1A1TA0A578 114 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 BTNL10A8MVZ5 291 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CLASP2O75122 1294 aaKnown RBP14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CYP1A2P05177 515 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 RRM1P23921 792 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CLCN4P51793 760 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 DDR2Q16832 855 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 LIN9Q5TKA1 542 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 XYLT1Q86Y38 959 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ARHGEF26Q96DR7 871 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 SYNCQ9H7C4 482 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CYP4F11Q9HBI6 524 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 LRRC4Q9HBW1 653 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 WDR35Q9P2L0 1181 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CNOT8Q9UFF9 292 aaKnown RBP14.8□□□□□ -0.04
SHMT2-203ENST00000449049 MYH10P35580 1976 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CEP290O15078 2479 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 USP27XA6NNY8 438 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 RFXAPO00287 272 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 PIK3R2O00459 728 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 PAPSS1O43252 624 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-203ENST00000449049 CCP110O43303 1012 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ATMINO43313 823 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-203ENST00000449049 SOAT2O75908 522 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 GLUD1P00367 558 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ATF6P18850 670 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ARHGAP25P42331 645 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ADIGQ0VDE8 80 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 KIF5AQ12840 1032 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 ZNF268Q14587 947 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-203ENST00000449049 TCEAL1Q15170 157 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 PTPROQ16827 1216 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 PLEKHA7Q6IQ23 1121 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 FAM183BPQ6ZVS7 135 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 MRPL38Q96DV4 380 aaKnown RBP14.8□□□□□ -0.04
SHMT2-203ENST00000449049 TSGA10Q9BZW7 698 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 YIPF1Q9Y548 306 aa14.8□□□□□ -0.04
SHMT2-203ENST00000449049 A0A0A6YYK5 440 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-203ENST00000449049 LCP1P13796 627 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 ELF1P32519 619 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 TKTL1P51854 596 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 SLC5A3P53794 718 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 LLGL2Q6P1M3 1020 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 SCML4Q8N228 414 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 C3orf20Q8ND61 904 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 SLC22A17Q8WUG5 538 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 RFFLQ8WZ73 363 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 MCRS1Q96EZ8 462 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 INSL5Q9Y5Q6 135 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 USP3Q9Y6I4 520 aa14.79□□□□□ -0.04
SHMT2-203ENST00000449049 PRRG1O14668 218 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 FBXO21O94952 628 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 SCNN1AP37088 669 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 SDHAF4Q5VUM1 108 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 OLFML1Q6UWY5 402 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 ADGRD2Q7Z7M1 963 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 ZSCAN30Q86W11 494 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 SCUBE3Q8IX30 993 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 RHOT2Q8IXI1 618 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 NUP93Q8N1F7 819 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 SIX6OS1Q8N1H7 587 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 CNGB3Q9NQW8 809 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 TRMT1Q9NXH9 659 aaKnown RBP14.78□□□□□ -0.04
SHMT2-203ENST00000449049 IL37Q9NZH6 218 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 MYO1AQ9UBC5 1043 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 SCINQ9Y6U3 715 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 KRT86O43790 486 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 ABL1P00519 1130 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 MAMLD1Q13495 774 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 PPP1R15BQ5SWA1 713 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 OR6B2Q6IFH4 312 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 CCDC149Q6ZUS6 474 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 DENND5BQ6ZUT9 1274 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 RTL10Q7L3V2 364 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 PHLDB2Q86SQ0 1253 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 KREMEN2Q8NCW0 462 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 CLEC4CQ8WTT0 213 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 ULBP1Q9BZM6 244 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 MRPL47Q9HD33 250 aaKnown RBP14.78□□□□□ -0.04
SHMT2-203ENST00000449049 UVRAGQ9P2Y5 699 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 TRIM10Q9UDY6 481 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 DUSP10Q9Y6W6 482 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 PDE4DIPQ5VU43 2346 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 LAMA2P24043 3122 aaKnown RBP14.78□□□□□ -0.04
SHMT2-203ENST00000449049 GREB1Q4ZG55 1949 aa14.78□□□□□ -0.04
SHMT2-203ENST00000449049 GOLGA6L9A6NEM1 432 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 MTA2O94776 668 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 SPATA31D3P0C874 917 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 ALDH1A3P47895 512 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 DAOAP59103 153 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 MRPS5P82675 430 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms