RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 LILRB5O75023 590 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 AP1G2O75843 785 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 SMC2O95347 1197 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 TCF3P15923 654 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 GCLMP48507 274 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 NDST1P52848 882 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 ENPEPQ07075 957 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 EDRF1Q3B7T1 1238 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 C1orf220Q5T0J3 134 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 SPOPLQ6IQ16 392 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 UNC93AQ86WB7 457 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 FMR1NBQ8N0W7 255 aaPredicted RBP20.91■□□□□ 0.94
VCP-203ENST00000448530 FBXO32Q969P5 355 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 EPC1Q9H2F5 836 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 ECT2Q9H8V3 914 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.91■□□□□ 0.944e-7■■■□□ 18.2
VCP-203ENST00000448530 SMG5Q9UPR3 1016 aaKnown RBP20.91■□□□□ 0.94
VCP-203ENST00000448530 SPTBN4Q9H254 2564 aa20.91■□□□□ 0.94
VCP-203ENST00000448530 TRDMT1O14717 391 aaKnown RBP20.9■□□□□ 0.94
VCP-203ENST00000448530 CETN3O15182 167 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 ATG13O75143 517 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 TDGF1P13385 188 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 TMEM196Q5HYL7 178 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 WDR44Q5JSH3 913 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 SMYD4Q8IYR2 804 aaPredicted RBP20.9■□□□□ 0.94
VCP-203ENST00000448530 GSDMAQ96QA5 445 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 KCNK16Q96T55 309 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 P2RY13Q9BPV8 354 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 KRT82Q9NSB4 513 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 TMEM30AQ9NV96 361 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 DMDP11532 3685 aa20.9■□□□□ 0.94
VCP-203ENST00000448530 OTOGLQ3ZCN5 2332 aa20.89■□□□□ 0.94
VCP-203ENST00000448530 LEFTY2O00292 366 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 STX10O60499 249 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 PAPSS2O95340 614 aaPredicted RBP20.89■□□□□ 0.93
VCP-203ENST00000448530 NFATC1O95644 943 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 EPB41P11171 864 aaKnown RBP20.89■□□□□ 0.93
VCP-203ENST00000448530 DRD1P21728 446 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 GJA4P35212 333 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 ASPAP45381 313 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 SLC7A9P82251 487 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 PPP3CAQ08209 521 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 ORC1Q13415 861 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 EML3Q32P44 896 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 ZCWPW2Q504Y3 356 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 FSTL4Q6MZW2 842 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 DDX42Q86XP3 938 aaKnown RBP eCLIP20.89■□□□□ 0.93
VCP-203ENST00000448530 KIAA2013Q8IYS2 634 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 FUKQ8N0W3 1084 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 CRYBG2Q8N1P7 616 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 OVCA2Q8WZ82 227 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 TSG101Q99816 390 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 GTPBP4Q9BZE4 634 aaKnown RBP20.89■□□□□ 0.93
VCP-203ENST00000448530 CYP3A43Q9HB55 503 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 TMEM8AQ9HCN3 771 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 CPQQ9Y646 472 aa20.89■□□□□ 0.93
VCP-203ENST00000448530 SLC9A3R1O14745 358 aaPredicted RBP20.88■□□□□ 0.93
VCP-203ENST00000448530 CCDC130P13994 396 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 GTF2H1P32780 548 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 GALK1P51570 392 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 SLC5A3P53794 718 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 ZNF658Q5TYW1 1059 aaPredicted RBP20.88■□□□□ 0.93
VCP-203ENST00000448530 PAQR9Q6ZVX9 377 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 SLC2A14Q8TDB8 520 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 TAS1R2Q8TE23 839 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 SMARCE1Q969G3 411 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 NIF3L1Q9GZT8 377 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 RNF38Q9H0F5 515 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 FAM49BQ9NUQ9 324 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 COMMD8Q9NX08 183 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 SMPD4Q9NXE4 827 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 HMGXB4Q9UGU5 601 aa20.88■□□□□ 0.93
VCP-203ENST00000448530 CHURC1-FNTBB4DL54 471 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 OAS1P00973 400 aaKnown RBP20.87■□□□□ 0.93
VCP-203ENST00000448530 MBL2P11226 248 aaPredicted RBP20.87■□□□□ 0.93
VCP-203ENST00000448530 FNTBP49356 437 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 FBXO43Q4G163 708 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 KRT39Q6A163 491 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 HEATR6Q6AI08 1181 aaKnown RBP20.87■□□□□ 0.93
VCP-203ENST00000448530 LONP2Q86WA8 852 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 DCLK2Q8N568 766 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 KIAA1958Q8N8K9 716 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 SCAMP5Q8TAC9 235 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 CD101Q93033 1021 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 CHFRQ96EP1 664 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 EEF2KMTQ96G04 330 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 NT5C1AQ9BXI3 368 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 LINC00597Q9H2U6 94 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 CHORDC1Q9UHD1 332 aaPredicted RBP20.87■□□□□ 0.93
VCP-203ENST00000448530 GMEB2Q9UKD1 530 aa20.87■□□□□ 0.93
VCP-203ENST00000448530 ATG2BQ96BY7 2078 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 K7ESF4 209 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 OLFM2O95897 454 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 EGFP01133 1207 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 FAM200BP0CF97 657 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 CD58P19256 250 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 ADORA2BP29275 332 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 CNR2P34972 360 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 PRCPP42785 496 aa20.86■□□□□ 0.93
VCP-203ENST00000448530 MAP3K7CLP57077 242 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms