RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TP73O15350 636 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 GABBR2O75899 941 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 ACSL3O95573 720 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 THP07101 528 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 NR1D1P20393 614 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 SDC4P31431 198 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CDH6P55285 790 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 OTUD4Q01804 1114 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 BST2Q10589 180 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 ARHGAP17Q68EM7 881 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 B4GALNT4Q76KP1 1039 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 OSTM1Q86WC4 334 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CRYBG2Q8N1P7 616 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 FAM172AQ8WUF8 416 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TNIP3Q96KP6 325 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 PPP1R10Q96QC0 940 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TSPAN18Q96SJ8 248 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 DDX23Q9BUQ8 820 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 DNAI2Q9GZS0 605 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 EPB41L4BQ9H329 900 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 RABEP2Q9H5N1 569 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TRMT13Q9NUP7 481 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 NEU2Q9Y3R4 380 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TIMM13Q9Y5L4 95 aaPredicted RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TRIP12Q14669 1992 aaPredicted RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CITO14578 2027 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 RIPK2O43353 540 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 KLRC2P26717 231 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 PTPN7P35236 360 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 PCK1P35558 622 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 SLCO1A2P46721 670 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 SCNN1GP51170 649 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CLCNKBP51801 687 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 BCAT1P54687 386 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 VCPP55072 806 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 EIF3BP55884 814 aaKnown RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 GNGT1P63211 74 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 GPS1Q13098 491 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 NOGQ13253 232 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 KRT81Q14533 505 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 TAB3Q8N5C8 712 aaPredicted RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 B3GALNT2Q8NCR0 500 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CMASQ8NFW8 434 aaPredicted RBP9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 ACTL9Q8TC94 416 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 MED10Q9BTT4 135 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 CHST12Q9NRB3 414 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 SLC38A7Q9NVC3 462 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 GPATCH2LQ9NWQ4 482 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 PADI3Q9ULW8 664 aa9.98□□□□□ -0.81
COL6A4P1-201ENST00000446690 GRIN2DO15399 1336 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 SCN1AP35498 2009 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 CAND2O75155 1236 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 TRPA1O75762 1119 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 POMCP01189 267 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 SETSIPP0DME0 302 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 DESP17661 470 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 ACTN2P35609 894 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 MAGOHP61326 146 aaKnown RBP9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 CAV1Q03135 178 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 SPDYCQ5MJ68 293 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 DSTYKQ6XUX3 929 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 ALLCQ8N6M5 410 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 TOP6BLQ8N6T0 577 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 BBOF1Q8ND07 529 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 GSTCDQ8NEC7 633 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 NDRG1Q92597 394 aaKnown RBP9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 HHIPL1Q96JK4 782 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 SENP8Q96LD8 212 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 CDC42EP4Q9H3Q1 356 aaKnown RBP9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
COL6A4P1-201ENST00000446690 DCDC2CA8MYV0 355 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 KIF3CO14782 793 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 PTPN1P18031 435 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 TFE3P19532 575 aaPredicted RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 TKTP29401 623 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 LRPAP1P30533 357 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 IRAK1P51617 712 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 SLC8A3P57103 927 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 GUCY1A3Q02108 690 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 MGAT3Q09327 533 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 ITGA7Q13683 1181 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 KYNUQ16719 465 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 DEFB115Q30KQ5 88 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 PAN2Q504Q3 1202 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 ZC3H12AQ5D1E8 599 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 MDH1BQ5I0G3 518 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 HP1BP3Q5SSJ5 553 aaPredicted RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 DRICH1Q6PGQ1 229 aaPredicted RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 C1orf228Q6PIY5 440 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 RHBDF2Q6PJF5 856 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 NPNTQ6UXI9 565 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 AGMOQ6ZNB7 445 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 HOOK3Q86VS8 718 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 KLHDC9Q8NEP7 349 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 CD99L2Q8TCZ2 262 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms