RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FIGNQ5HY92 759 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TRIM69Q86WT6 500 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PAWRQ96IZ0 340 aaKnown RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PLEKHA8Q96JA3 519 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TGS1Q96RS0 853 aaKnown RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 KCNK16Q96T55 309 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM134Q9H6X4 195 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 RMND5AQ9H871 391 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 NFASCO94856 1347 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 SF3B1O75533 1304 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 A0A0A6YYK5 440 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TBKBP1A7MCY6 615 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PP2D1A8MPX8 630 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 MLNP12872 115 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 WDR18Q9BV38 432 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 TRHDEQ9UKU6 1024 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 ACKR2O00590 384 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PLA2G6O60733 806 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 GUCY1B2O75343 617 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 IGSF6O95976 241 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 ITGB6P18564 788 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 LIG3P49916 1009 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 KLHDC7AQ5VTJ3 777 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 KRT78Q8N1N4 520 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF655Q8N720 491 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 NFKBIZQ9BYH8 718 aa8.86□□□□□ -0.99
PTPN3-204ENST00000446349 METTL5Q9NRN9 209 aaKnown RBP8.86□□□□□ -0.99
PTPN3-204ENST00000446349 UNCXA6NJT0 531 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 NPTX2P47972 431 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 RNF168Q8IYW5 571 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CASP10Q92851 521 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 LRRC40Q9H9A6 602 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PYCARDQ9ULZ3 195 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CLUHO75153 1309 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CCDC189A1A4V9 331 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 H3BMM5 538 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 EIF3HO15372 352 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ADCY3O60266 1144 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PQBP1O60828 265 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 RBP3P10745 1247 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CHRM3P20309 590 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 YWHAQP27348 245 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 HALP42357 657 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PIK3CGP48736 1102 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 C1QBPQ07021 282 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 NCAPHQ15003 741 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 VAT1Q99536 393 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 WWOXQ9NZC7 414 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 BAZ2BQ9UIF8 2168 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TKTP29401 623 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 SLC22A9Q8IVM8 553 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 IPMKQ8NFU5 416 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 LENG9Q96B70 501 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 FAM124BQ9H5Z6 455 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CYP4F11Q9HBI6 524 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 C6orf203Q9P0P8 240 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 VPS28Q9UK41 221 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 CYP11B1P15538 503 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 STX3Q13277 289 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 FLOT2Q14254 428 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 NR1I3Q14994 352 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 KIZQ2M2Z5 673 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 STOX1Q6ZVD7 989 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ICA1LQ8NDH6 482 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 SPATA4Q8NEY3 305 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 RBM15Q96T37 977 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TASP1Q9H6P5 420 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 DTNAQ9Y4J8 743 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 IFT172Q9UG01 1749 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PSMD12O00232 456 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TADA3O75528 432 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ACO1P21399 889 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 DACT2Q5SW24 774 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 AGBL2Q5U5Z8 902 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 C1orf146Q5VVC0 180 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 METTL16Q86W50 562 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 LRRC49Q8IUZ0 686 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 STK40Q8N2I9 435 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 MKL1Q969V6 931 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ACSF2Q96CM8 615 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM117Q9H0C3 514 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 RANBP17Q9H2T7 1088 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 PHLPP1O60346 1717 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TRAV19A0A0A6YYK7 116 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 FAM170AA1A519 330 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM88BA6NKF7 163 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 KPNA5O15131 536 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 RBP1P09455 135 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 MAP2K2P36507 400 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ATP6V1G3Q96LB4 118 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 TRAF3IP3Q9Y228 551 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 AP3M1Q9Y2T2 418 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 MTO1Q9Y2Z2 717 aaKnown RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 MORC2Q9Y6X9 1032 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 UBR1Q8IWV7 1749 aa8.85□□□□□ -0.99
PTPN3-204ENST00000446349 ZSCAN5CA6NGD5 496 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-204ENST00000446349 HACD1B0YJ81 288 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms