RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 GABRB2P47870 512 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 SNX1Q13596 522 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 XYLT1Q86Y38 959 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 SLC35F5Q8WV83 523 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CASD1Q96PB1 797 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 MCEEQ96PE7 176 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 HNRNPABQ99729 332 aaKnown RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CD248Q9HCU0 757 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TJP2Q9UDY2 1190 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 IP6K2Q9UHH9 426 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CDH9Q9ULB4 789 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 GJB6O95452 261 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TIMP1P01033 207 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TYMPP19971 482 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 RGS7P49802 495 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 GATMP50440 423 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TUBB4BP68371 445 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 OVOS1Q6IE37 1185 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 SDCCAG8Q86SQ7 713 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 FUKQ8N0W3 1084 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 ATL2Q8NHH9 583 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 EZH1Q92800 747 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 GOLGA1Q92805 767 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 NRDE2Q9H7Z3 1164 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 DNAJB4Q9UDY4 337 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 SIGLEC16A6NMB1 481 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TBKBP1A7MCY6 615 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 E5RJQ4 531 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 F8W810 466 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PDE2AO00408 941 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 KIAA0355O15063 1070 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 DDX3YO15523 660 aaKnown RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CEP104O60308 925 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 TADA2AO75478 443 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CAPN15O75808 1086 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 ALDH2P05091 517 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 MDH1BQ5I0G3 518 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 BEND6Q5SZJ8 279 aaPredicted RBP8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PMF1Q6P1K2 205 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 MFN1Q8IWA4 741 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 THEM5Q8N1Q8 247 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 MCRS1Q96EZ8 462 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 ACBD6Q9BR61 282 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 MED10Q9BTT4 135 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CARD9Q9H257 536 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 CRTAC1Q9NQ79 661 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 PCDHB8Q9UN66 801 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
CCDC39-201ENST00000442201 KIAA0100Q14667 2235 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ABHD14A-ACY1A0A1B0GW23 586 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 RASSF9O75901 435 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 UPP2O95045 317 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TKTP29401 623 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CLNS1AP54105 237 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 YWHAHQ04917 246 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 KIAA0319Q5VV43 1072 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 OR6B2Q6IFH4 312 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 HDXQ7Z353 690 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TMEM110Q86TL2 294 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MYCBPAPQ8TBZ2 947 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CD101Q93033 1021 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MS4A14Q96JA4 679 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 COLEC11Q9BWP8 271 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CYLDQ9NQC7 956 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 RAB21Q9UL25 225 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MYBPHLA2RUH7 354 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TRIM43BA6NCK2 446 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 NRP1O14786 923 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CTNNA2P26232 953 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MAN1A1P33908 653 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CTNNA1P35221 906 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 RFC1P35251 1148 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ACADSBP45954 432 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PIGHQ14442 188 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CCDC142Q17RM4 750 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 FAM102AQ5T9C2 384 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 LRRC43Q8N309 656 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TMEM199Q8N511 208 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ALG3Q92685 438 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 KRT35Q92764 455 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TRIM43Q96BQ3 446 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 HSFY1Q96LI6 401 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 DUSP16Q9BY84 665 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PARD6BQ9BYG5 372 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MCOLN1Q9GZU1 580 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ACBD3Q9H3P7 528 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PCDHA3Q9Y5H8 950 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PIK3R2O00459 728 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CLDN5O00501 218 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 XPO1O14980 1071 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 FAM200BP0CF97 657 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CSF2RAP15509 400 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms