RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ADGRE3Q9BY15 652 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 PHLPP1O60346 1717 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 SETSIPP0DME0 302 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 ACRP10323 421 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 HDCP19113 662 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 ATAT1Q5SQI0 421 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 NOL9Q5SY16 702 aaKnown RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 PDCD7Q8N8D1 485 aaKnown RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 MIPOL1Q8TD10 442 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 HES6Q96HZ4 224 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 BRD8Q9H0E9 1235 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 MED4Q9NPJ6 270 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEK1-201ENST00000439128 SGPL1O95470 568 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 LAG3P18627 525 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 EIF4BP23588 611 aaKnown RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 CAPZA2P47755 286 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 KLHDC7AQ5VTJ3 777 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 TRMT11Q7Z4G4 463 aaKnown RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 LPCAT1Q8NF37 534 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 SLC5A5Q92911 643 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 CNOT10Q9H9A5 744 aaKnown RBP12.56□□□□□ -0.4
NEK1-201ENST00000439128 HES2Q9Y543 173 aa12.56□□□□□ -0.4
NEK1-201ENST00000439128 EIF4E1BA6NMX2 242 aaKnown RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 POLBP06746 335 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 GJB1P08034 283 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 GUCY2CP25092 1073 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 CRHR2Q13324 411 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 ZNF720Q7Z2F6 126 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 CCDC60Q8IWA6 550 aaPredicted RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 BTBD6Q96KE9 485 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 SPACA7Q96KW9 195 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 PSD3Q9NYI0 1048 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 ESRRAP11474 423 aaPredicted RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 BRAFP15056 766 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 ALOX15P16050 662 aaPredicted RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 MSH3P20585 1137 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 RARRES1P49788 294 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 AARS2Q5JTZ9 985 aaKnown RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 FAM71DQ8N9W8 422 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 KAT2BQ92831 832 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 ASB7Q9H672 318 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 KIF17Q9P2E2 1029 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 NUDT5Q9UKK9 219 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 VPS9D1Q9Y2B5 631 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 IGSF6O95976 241 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 RHBDL3P58872 404 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 ACAD10Q6JQN1 1059 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 TAGAPQ8N103 731 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 TEKT2Q9UIF3 430 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 TRAF3IP3Q9Y228 551 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 TRIM16O95361 564 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 PNMA6AP0CW24 399 aaPredicted RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 CCDC130P13994 396 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 DARSP14868 501 aaKnown RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 RENBPP51606 427 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 CRYBB1P53674 252 aaPredicted RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
NEK1-201ENST00000439128 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
NEK1-201ENST00000439128 NT5DC3Q86UY8 548 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 KIAA0319LQ8IZA0 1049 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 CASP7P55210 303 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 SERPINA13PQ6UXR4 307 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 LRRC8DQ7L1W4 858 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 OTOP1Q7RTM1 612 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 APPL1Q9UKG1 709 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 TSPAN16Q9UKR8 245 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 SLC27A5Q9Y2P5 690 aa12.55□□□□□ -0.4
NEK1-201ENST00000439128 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 YDJCA8MPS7 323 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 NCAM2O15394 837 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 RAMP2O60895 175 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 CTDNEP1O95476 244 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 MMEP08473 750 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 COMTP21964 271 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 TP53BP2Q13625 1128 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 DDX39BQ13838 428 aaKnown RBP12.54□□□□□ -0.4
NEK1-201ENST00000439128 KRT72Q14CN4 511 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 ADAM33Q9BZ11 813 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 PSMD12O00232 456 aaPredicted RBP12.54□□□□□ -0.4
NEK1-201ENST00000439128 RBP3P10745 1247 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 KLK7P49862 253 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 GRIN1Q05586 938 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 VSIG10LQ86VR7 867 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 TMEM86AQ8N2M4 240 aa12.54□□□□□ -0.4
NEK1-201ENST00000439128 RUBCNLQ9H714 662 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms