RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 LTFP02788 710 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 NFICP08651 508 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 ITGAXP20702 1163 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 YY1P25490 414 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 EPHB2P29323 1055 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 CENPCQ03188 943 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 CSHL1Q14406 222 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 TRIM48Q8IWZ4 208 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 SUGP1Q8IWZ8 645 aaKnown RBP11.81□□□□□ -0.52
SEC16A-206ENST00000431893 SNPHO15079 494 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 FOXO4P98177 505 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 HIST2H2ACQ16777 129 aaPredicted RBP11.81□□□□□ -0.52
SEC16A-206ENST00000431893 ATP6AP1LQ52LC2 224 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 TBCELQ5QJ74 424 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 HIST2H2AA3Q6FI13 130 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 DEFB107AQ8IZN7 70 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 PARP8Q8N3A8 854 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 SERPINB12Q96P63 405 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 RPS6KB2Q9UBS0 482 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 KLHL20Q9Y2M5 609 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 H3BQF6 201 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 RHOBTB3O94955 611 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 STAU1O95793 577 aaKnown RBP11.81□□□□□ -0.52
SEC16A-206ENST00000431893 STRA8Q7Z7C7 330 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 UNC45BQ8IWX7 931 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 VPS37AQ8NEZ2 397 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 CPB2Q96IY4 423 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 BCL2L14Q9BZR8 327 aa11.81□□□□□ -0.52
SEC16A-206ENST00000431893 TMEM253P0C7T8 217 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ITGA4P13612 1032 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CCT8P50990 548 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 NCF4Q15080 339 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ARMC4Q5T2S8 1044 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CARNMT1Q8N4J0 409 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 EXD1Q8NHP7 514 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 MED8Q96G25 268 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ACOX2Q99424 681 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PIM2Q9P1W9 311 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 COL15A1P39059 1388 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ZNF609O15014 1411 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 GNG14A0A1W2PPG7 69 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ERI2A8K979 691 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 P4HA2O15460 535 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ITIH4Q14624 930 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 NECAB2Q7Z6G3 386 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 WDR36Q8NI36 951 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 HPDLQ96IR7 371 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 WDCPQ9H6R7 721 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CDHR2Q9BYE9 1310 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 FOSL2P15408 326 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CLK2P49760 499 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 INAQ16352 499 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 AGAP9Q5VTM2 703 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 AHI1Q8N157 1196 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 DDI1Q8WTU0 396 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 TAGLN3Q9UI15 199 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ATP10AO60312 1499 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 IQCMA0A1B0GVH7 501 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SMAPO00193 183 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ASNA1O43681 348 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 TBC1D12O60347 775 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SERPINB8P50452 374 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 AGKQ53H12 422 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PDZK1Q5T2W1 519 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PTAR1Q7Z6K3 402 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 FAM228AQ86W67 206 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 KRT35Q92764 455 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 GINS4Q9BRT9 223 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 FICDQ9BVA6 458 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SSU72P8A0A1W2PR75 194 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 UBE2Q2LH0YL09 131 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 THRAP10827 490 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 KCTD19Q17RG1 926 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ACAD10Q6JQN1 1059 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CYP2R1Q6VVX0 501 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ZBTB49Q6ZSB9 765 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SLC13A5Q86YT5 568 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 MMGT1Q8N4V1 131 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.8□□□□□ -0.529e-10■■■■■ 79.8
SEC16A-206ENST00000431893 ANKS1AQ92625 1134 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PPP1R10Q96QC0 940 aaKnown RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 PAFAH2Q99487 392 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 TMEM8AQ9HCN3 771 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CLASP1Q7Z460 1538 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 CCNIQ14094 377 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 ACAP1Q15027 740 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SEL1L3Q68CR1 1132 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SETD3Q86TU7 594 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-206ENST00000431893 SIX5Q8N196 739 aa11.8□□□□□ -0.52
SEC16A-206ENST00000431893 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms