RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 LAMB2P55268 1798 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 TCRBV5S4A2TA0A5A2 114 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 GMNNO75496 209 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ATP5BP06576 529 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 H2AFZP0C0S5 128 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 CETPP11597 493 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ITIH2P19823 946 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ATICP31939 592 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ESRRGP62508 458 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF200P98182 395 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 UBE4AQ14139 1066 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF174Q15697 407 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZBED5Q49AG3 693 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 PPP1R2P3Q6NXS1 205 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 ALKBH5Q6P6C2 394 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 IDO2Q6ZQW0 420 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 H2AFVQ71UI9 128 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 GPR141Q7Z602 305 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 POU5F2Q8N7G0 328 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 PRELID2Q8N945 189 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 SLC26A7Q8TE54 656 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 TMIGD2Q96BF3 282 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 C12orf43Q96C57 262 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 C18orf8Q96DM3 657 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 VMP1Q96GC9 406 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 WNK4Q96J92 1243 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 CALN1Q9BXU9 219 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 RSPH9Q9H1X1 276 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 KCNK13Q9HB14 408 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 FBXO6Q9NRD1 293 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 PCDHB4Q9Y5E5 795 aa9.23□□□□□ -0.93
CDC42BPA-206ENST00000429440 SYNGAP1Q96PV0 1343 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ARHGEF35A5YM69 484 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 SNAP23O00161 211 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ABHD2P08910 425 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TTKP33981 857 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF135P52742 658 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 YWHAGP61981 247 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CAV1Q03135 178 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 OASLQ15646 514 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 NPTX1Q15818 432 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 KLHL38Q2WGJ6 581 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CCDC137Q6PK04 289 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 RELL1Q8IUW5 271 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TBC1D10CQ8IV04 446 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 RTKN2Q8IZC4 609 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 BBOF1Q8ND07 529 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GSTCDQ8NEC7 633 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 NEDD1Q8NHV4 660 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GSDMBQ8TAX9 411 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 HM13Q8TCT9 377 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CAPSLQ8WWF8 208 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CLPTM1LQ96KA5 538 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CNBD2Q96M20 576 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 COQ7Q99807 217 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TMEM120AQ9BXJ8 343 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TP63Q9H3D4 680 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 SEMA6BQ9H3T3 888 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRABDQ9H4I3 376 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TBK1Q9UHD2 729 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 PCDHGB4Q9UN71 923 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 PCDHGB5Q9Y5G0 923 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GAKO14976 1311 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 FAM205CA6NFA0 338 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ACOX3O15254 700 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 THAP12O43422 761 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TYROBPO43914 113 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 DLDP09622 509 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GPD2P43304 727 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ITGADQ13349 1161 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CCNIQ14094 377 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TRIP13Q15645 432 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 RTN1Q16799 776 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ANO4Q32M45 955 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TMEM67Q5HYA8 995 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 SUSD4Q5VX71 490 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TAS2R42Q7RTR8 314 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 TICAM1Q8IUC6 712 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GPIHBP1Q8IV16 184 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 PPM1KQ8N3J5 372 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ADCY4Q8NFM4 1077 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GIMAP5Q96F15 307 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 VPS35Q96QK1 796 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CLPBQ9H078 707 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 VPS11Q9H270 941 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 SOX13Q9UN79 622 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 CFL2Q9Y281 166 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 ZNF652Q9Y2D9 606 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 GPSM3Q9Y4H4 160 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 AP4S1Q9Y587 144 aa9.22□□□□□ -0.93
CDC42BPA-206ENST00000429440 A0A1B0GUL6 1792 aa9.21□□□□□ -0.93
CDC42BPA-206ENST00000429440 COL5A3P25940 1745 aaPredicted RBP9.21□□□□□ -0.93
CDC42BPA-206ENST00000429440 PSME4Q14997 1843 aa9.21□□□□□ -0.93
CDC42BPA-206ENST00000429440 GOLGA8IPA6NC78 632 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms