RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NRCAMQ92823 1304 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 SMIM35A0A1B0GVV1 85 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 FAM47DPA6NHR8 397 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 SLC15A5A6NIM6 579 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CCT8L1PA6NM43 557 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 ENDOD1O94919 500 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CD48P09326 243 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CYP3A5P20815 502 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 AXLP30530 894 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 STIP1P31948 543 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 IL9RQ01113 521 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 KRT81Q14533 505 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 NOMO1Q15155 1222 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 BOLA3Q53S33 107 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 PACS2Q86VP3 889 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CYP4X1Q8N118 509 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CNPY4Q8N129 248 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 NAT8LQ8N9F0 302 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 SPATA18Q8TC71 538 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 STK32AQ8WU08 396 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 TEKT4Q8WW24 435 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CPT1BQ92523 772 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CCT6BQ92526 530 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 MAML1Q92585 1016 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 USP6NLQ92738 828 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 MAGEB18Q96M61 343 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 PEBP4Q96S96 227 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 TSPAN18Q96SJ8 248 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 TBCBQ99426 244 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 ELAC2Q9BQ52 826 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 PLCD4Q9BRC7 762 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 TRIM6Q9C030 488 aaPredicted RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 SETD4Q9NVD3 440 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 SMG5Q9UPR3 1016 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 KAT6AQ92794 2004 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 TCP11X1B4DZS4 312 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 XPOTO43592 962 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 CAPN15O75808 1086 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 PFKMP08237 780 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 RBP3P10745 1247 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CREB1P16220 341 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 ATP2A2P16615 1042 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 SDC4P31431 198 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 SLC18A1P54219 525 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 GDF10P55107 478 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 FASTKD3Q14CZ7 662 aaKnown RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 KLHL38Q2WGJ6 581 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 OLFML1Q6UWY5 402 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 TRABD2AQ86V40 505 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 PYROXD1Q8WU10 500 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 SLC4A5Q9BY07 1137 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 OSBPL7Q9BZF2 842 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 FAM49AQ9H0Q0 323 aaPredicted RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 SNTG2Q9NY99 539 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 CNTN3Q9P232 1028 aa14.31□□□□□ -0.12
THBS3-202ENST00000428962 PSMC3IPQ9P2W1 217 aaPredicted RBP14.31□□□□□ -0.12
THBS3-202ENST00000428962 CFAP69A5D8W1 941 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 E7ESA3 106 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 POC1B-GALNT4F8VUJ3 575 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.12
THBS3-202ENST00000428962 SNX3O60493 162 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 GPR32O75388 356 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 SUN1O94901 812 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 F2P00734 622 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 CD4P01730 458 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 GSTA1P08263 222 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 TGM2P21980 687 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 SLC6A3Q01959 620 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 RNASELQ05823 741 aaKnown RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 DPYSL3Q14195 570 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 ZBTB6Q15916 424 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 PKDCCQ504Y2 493 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 PPP1R26Q5T8A7 1209 aaPredicted RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 CST9Q5W186 159 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 ARHGAP17Q68EM7 881 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 DARS2Q6PI48 645 aaKnown RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 PDIK1LQ8N165 341 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 ZNF560Q96MR9 790 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 SMC6Q96SB8 1091 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 ABT1Q9ULW3 272 aaKnown RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 GINS2Q9Y248 185 aa14.3□□□□□ -0.12
THBS3-202ENST00000428962 USP15Q9Y4E8 981 aaPredicted RBP14.3□□□□□ -0.12
THBS3-202ENST00000428962 ZNF487B1APH4 448 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 CELF2O95319 508 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 OAS1P00973 400 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 CYP2C9P11712 490 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 DARSP14868 501 aaKnown RBP14.29□□□□□ -0.12
THBS3-202ENST00000428962 KRT15P19012 456 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 GCAP28676 217 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 SCNN1AP37088 669 aa14.29□□□□□ -0.12
THBS3-202ENST00000428962 PNPLA4P41247 253 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms