RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 SYAP1Q96A49 352 aaPredicted RBP13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 ACDQ96AP0 544 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 CNTNAP3BQ96NU0 1288 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 CNTNAP3Q9BZ76 1288 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 DMAC2Q9NW81 257 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 NXF1Q9UBU9 619 aaKnown RBP13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 EBF1Q9UH73 591 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 CPQQ9Y646 472 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 TCHHQ07283 1943 aa13.9□□□□□ -0.18
DEPDC7-203ENST00000427755 SPTBN2O15020 2390 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 LRRIQ3A6PVS8 624 aaPredicted RBP13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 TM4SF5O14894 197 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 DCLK1O15075 740 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 ACTN4O43707 911 aaKnown RBP13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 EXOC3O60645 756 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 APBB3O95704 486 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 C4BPAP04003 597 aaKnown RBP13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 PDIA4P13667 645 aaKnown RBP13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 ME1P48163 572 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 LIMK1P53667 647 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 CDH8P55286 799 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 MESP2Q0VG99 397 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 STK4Q13043 487 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 PPM1JQ5JR12 505 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 KIAA0895Q8NCT3 520 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 TMEM174Q8WUU8 243 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 SDCBP2Q9H190 292 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 DUSP15Q9H1R2 295 aaPredicted RBP13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 SMPD4Q9NXE4 827 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 SERTAD1Q9UHV2 236 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 PCDHGA5Q9Y5G8 931 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 OBSL1O75147 1896 aa13.89□□□□□ -0.19
DEPDC7-203ENST00000427755 SCAMP3O14828 347 aaKnown RBP13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 VNN1O95497 513 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 SLFN14P0C7P3 912 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 DNM1Q05193 864 aaKnown RBP13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 PSMD2Q13200 908 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 DHCR24Q15392 516 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 AASDHQ4L235 1098 aaPredicted RBP13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 SLC9A9Q8IVB4 645 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 SFTPA1Q8IWL2 248 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 ZFRQ96KR1 1074 aaKnown RBP13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 SLITRK1Q96PX8 696 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 KCNK16Q96T55 309 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 KCTD10Q9H3F6 313 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 SMOC1Q9H4F8 434 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 DENND4CQ5VZ89 1909 aa13.88□□□□□ -0.19
DEPDC7-203ENST00000427755 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 COCHO43405 550 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 PHACTR2O75167 634 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 ABL1P00519 1130 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 YWHAQP27348 245 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 MPLP40238 635 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 SLC6A11P48066 632 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 AP3M2P53677 418 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 SEC13P55735 322 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 BIRC3Q13489 604 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 NCOA4Q13772 614 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 ZNF699Q32M78 642 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 SNX30Q5VWJ9 437 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 RHBDF2Q6PJF5 856 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 C12orf40Q86WS4 652 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 NUP93Q8N1F7 819 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 C12orf50Q8NA57 414 aaPredicted RBP13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 SCAMP5Q8TAC9 235 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 GOLGA5Q8TBA6 731 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 OVCA2Q8WZ82 227 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
DEPDC7-203ENST00000427755 A0A0A0MRY4 1105 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 FAM92AA1XBS5 289 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 SLC9A3R1O14745 358 aaPredicted RBP13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 RTN3O95197 1032 aaPredicted RBP13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 ZDHHC11BP0C7U3 371 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 MBL2P11226 248 aaPredicted RBP13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 HNRNPLP14866 589 aaKnown RBP eCLIP13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 EIF2DP41214 584 aaKnown RBP13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 DGKEP52429 567 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 SLC5A3P53794 718 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 DLG4P78352 724 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 IFRD2Q12894 506 aaPredicted RBP13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 KMT5BQ4FZB7 885 aa13.86□□□□□ -0.19
DEPDC7-203ENST00000427755 C2orf27AQ580R0 203 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms