RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NOL4O94818 638 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CLSTN1O94985 981 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 C8AP07357 584 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 HNRNPA1P09651 372 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SRGAP2BP0DMP2 458 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CD58P19256 250 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CYP2F1P24903 491 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 HOXA9P31269 272 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 KLK7P49862 253 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 FANCCQ00597 558 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 GCNT1Q02742 428 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 TFF2Q03403 129 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 ORC1Q13415 861 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 NR1I3Q14994 352 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CLUL1Q15846 466 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 NFE2Q16621 373 aaPredicted RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CFAP221Q4G0U5 840 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 ZNF394Q53GI3 561 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 MDH1BQ5I0G3 518 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 PPM1LQ5SGD2 360 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 RARS2Q5T160 578 aaKnown RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 KLHDC7AQ5VTJ3 777 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 TMC5Q6UXY8 1006 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CYP26C1Q6V0L0 522 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CCDC149Q6ZUS6 474 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 GPR149Q86SP6 731 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 GAS2L3Q86XJ1 694 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 VWA5B2Q8N398 1253 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 PPM1KQ8N3J5 372 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 TTC39CQ8N584 583 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 C12orf29Q8N999 325 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SLC4A11Q8NBS3 891 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 B3GALNT2Q8NCR0 500 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SMRP1Q8NCR6 262 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 ANKRD20A12PQ8NF67 263 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SLC7A14Q8TBB6 771 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 MYCBPAPQ8TBZ2 947 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 C2orf15Q8WU43 125 aaKnown RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 MYLPFQ96A32 169 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 JAKMIP2Q96AA8 810 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 PCED1BQ96HM7 432 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 TMEM176AQ96HP8 235 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 TNIP3Q96KP6 325 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 ERGIC2Q96RQ1 377 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 APOL5Q9BWW9 433 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 NT5C1AQ9BXI3 368 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 NAA15Q9BXJ9 866 aaKnown RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 RHOBTB2Q9BYZ6 727 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 ADAM7Q9H2U9 754 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SFXN1Q9H9B4 322 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CUEDC1Q9NWM3 386 aaPredicted RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 ZDHHC7Q9NXF8 308 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CEP72Q9P209 647 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 APEX2Q9UBZ4 518 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CD207Q9UJ71 328 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CDH22Q9UJ99 828 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 DNAJC12Q9UKB3 198 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 AJAP1Q9UKB5 411 aaPredicted RBP7.88□□□□□ -1.15
LINC01049-201ENST00000426840 INSL5Q9Y5Q6 135 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 NOTCH4Q99466 2003 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 A0A1B0GTH6 734 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 TMEM229AB2RXF0 380 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 GOLGA6L19H0YKK7 550 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 FOXN3O00409 490 aaPredicted RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 PES1O00541 588 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 PRRG1O14668 218 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 CCL16O15467 120 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 TPM2P07951 284 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 POU2F2P09086 479 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 BDNFP23560 247 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 MAGEA11P43364 429 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 TUFMP49411 452 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 GPR15P49685 360 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 CACNA2D1P54289 1103 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 MFAP3P55082 362 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 YWHAEP62258 255 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 UBXN1Q04323 297 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 ITIH3Q06033 890 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 TWF1Q12792 350 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 SYCP1Q15431 976 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 DDR2Q16832 855 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 FKBP15Q5T1M5 1219 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 LIN9Q5TKA1 542 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 IQCEQ6IPM2 695 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 ELMSAN1Q6PJG2 1045 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 C4orf50Q6ZRC1 276 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 ENOSF1Q7L5Y1 443 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 SPATA2LQ8IUW3 424 aaPredicted RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 FUKQ8N0W3 1084 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 GPR161Q8N6U8 529 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 ATXN2LQ8WWM7 1075 aaKnown RBP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 SUSD6Q92537 303 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 CYFIP2Q96F07 1278 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 FUBP3Q96I24 572 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC01049-201ENST00000426840 FAM81BQ96LP2 452 aa7.87□□□□□ -1.15
LINC01049-201ENST00000426840 HEXIM2Q96MH2 286 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms