RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SMOQ99835 787 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 FBXO44Q9H4M3 255 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 KRT82Q9NSB4 513 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 TMLHEQ9NVH6 421 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 ABI2Q9NYB9 513 aaPredicted RBP10.87□□□□□ -0.67
MDC1-205ENST00000425072 TRIM10Q9UDY6 481 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 AFF4Q9UHB7 1163 aaKnown RBP10.87□□□□□ -0.67
MDC1-205ENST00000425072 DNAI1Q9UI46 699 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 CYTH4Q9UIA0 394 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 AMFRQ9UKV5 643 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 IRAK3Q9Y616 596 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 VWA8A3KMH1 1905 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 PTPRSQ13332 1948 aa10.87□□□□□ -0.67
MDC1-205ENST00000425072 A0A0U1RQJ8 604 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 E5RJQ4 531 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 LILRB3O75022 631 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 PALMO75781 387 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 RTN3O95197 1032 aaPredicted RBP10.86□□□□□ -0.67
MDC1-205ENST00000425072 ATF2P15336 505 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 PRLRP16471 622 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 NDUFV1P49821 464 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 TKTL1P51854 596 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 RABGGTBP53611 331 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 ERVK-21P61565 698 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
MDC1-205ENST00000425072 MESDQ14696 234 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 RAB41Q5JT25 222 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 CYP4A22Q5TCH4 519 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SYT10Q6XYQ8 523 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 PEX26Q7Z412 305 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SLFN11Q7Z7L1 901 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 DAAM2Q86T65 1068 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 DNAAF5Q86Y56 855 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SCN4BQ8IWT1 228 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 NUP93Q8N1F7 819 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 MRPL43Q8N983 215 aaKnown RBP10.86□□□□□ -0.67
MDC1-205ENST00000425072 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.86□□□□□ -0.67
MDC1-205ENST00000425072 SPPL3Q8TCT6 385 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 FNIP1Q8TF40 1166 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 ATRIPQ8WXE1 791 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 IRGQQ8WZA9 623 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SPATA17Q96L03 361 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 KCNK16Q96T55 309 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 VN1R3Q9BXE9 311 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 IRX2Q9BZI1 471 aaPredicted RBP10.86□□□□□ -0.67
MDC1-205ENST00000425072 ZBP1Q9H171 429 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 ASNSD1Q9NWL6 643 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 DPP7Q9UHL4 492 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SALL4Q9UJQ4 1053 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
MDC1-205ENST00000425072 ALG6Q9Y672 507 aa10.86□□□□□ -0.67
MDC1-205ENST00000425072 SPTBN5Q9NRC6 3674 aaKnown RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 LCHNA4D1U4 455 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 GOLGA8SH3BPF8 625 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 TULP2O00295 520 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 PAPSS1O43252 624 aaPredicted RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 RNF8O76064 485 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 BEST1O76090 585 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ZBED1O96006 694 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ERBB2P04626 1255 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ADH1AP07327 375 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 OR4Q2P0C623 313 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 LINC00271P0C7V0 271 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 HAPLN1P10915 354 aaPredicted RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 ALDH1A3P47895 512 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 YWHAZP63104 245 aaKnown RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 ROR1Q01973 937 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 DUSP4Q13115 394 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 RPS6KA1Q15418 735 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 MGAT5BQ3V5L5 792 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 C2CD6Q53TS8 623 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 FAM102AQ5T9C2 384 aaPredicted RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 PM20D1Q6GTS8 502 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 C11orf63Q6NUN7 778 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ELMSAN1Q6PJG2 1045 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 RSPO2Q6UXX9 243 aaPredicted RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 SLC26A9Q7LBE3 791 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 PHLDB2Q86SQ0 1253 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 MON1AQ86VX9 555 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 SLC35F6Q8N357 371 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ARHGAP18Q8N392 663 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ATAD1Q8NBU5 361 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 NAPGQ99747 312 aaPredicted RBP10.85□□□□□ -0.67
MDC1-205ENST00000425072 SLC28A3Q9HAS3 691 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 OSGEPQ9NPF4 335 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 RRN3Q9NYV6 651 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 COG5Q9UP83 839 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
MDC1-205ENST00000425072 TCRBV5S1A1TA0A578 114 aa10.84□□□□□ -0.67
MDC1-205ENST00000425072 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
MDC1-205ENST00000425072 GRID2IPA4D2P6 1211 aa10.84□□□□□ -0.67
MDC1-205ENST00000425072 MTMR11A4FU01 709 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms