RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MAP3K21Q5TCX8 1036 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SNX30Q5VWJ9 437 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 TCTN3Q6NUS6 607 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 RUFY3Q7L099 469 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 NUP54Q7Z3B4 507 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 PPP1R42Q7Z4L9 355 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CHD1LQ86WJ1 897 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 LURAP1LQ8IV03 231 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 IQCF2Q8IXL9 164 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 KIAA2013Q8IYS2 634 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SLC16A11Q8NCK7 471 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF540Q8NDQ6 660 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ANKRD20A12PQ8NF67 263 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 IL31RAQ8NI17 732 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CYP2W1Q8TAV3 490 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 AUTS2Q8WXX7 1259 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CTNNBL1Q8WYA6 563 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 HSPH1Q92598 858 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF653Q96CK0 615 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CHFRQ96EP1 664 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CDCA5Q96FF9 252 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 NEIL1Q96FI4 390 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SUCLG2Q96I99 432 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 C16orf45Q96MC5 204 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 FNBP1Q96RU3 617 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SLX1AQ9BQ83 275 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MXD3Q9BW11 206 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 GPR63Q9BZJ6 419 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ACAD9Q9H845 621 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 TMEM8AQ9HCN3 771 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ERVK-5Q9HDB9 667 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 INCENPQ9NQS7 918 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 PCDHGB4Q9UN71 923 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ABCC9O60706 1549 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ATAD2BQ9ULI0 1458 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CCDC78A2IDD5 438 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 C2orf81A6NN90 581 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 PODXLO00592 558 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 UBE2CO00762 179 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 TXNL1O43396 289 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 HTRA2O43464 458 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 FOXS1O43638 330 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ERAL1O75616 437 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ENDOD1O94919 500 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 MLYCDO95822 493 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 AFPP02771 609 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 C4BPAP04003 597 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ATP5BP06576 529 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 CSF1P09603 554 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 HNRNPA1P09651 372 aaKnown RBP eCLIP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 HSPA1AP0DMV8 641 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 HSPA1BP0DMV9 641 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RGS2P41220 211 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 GDF5P43026 501 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 PSMC4P43686 418 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 CCR5P51681 352 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RCAN1P53805 252 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RAD23AP54725 363 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RRADP55042 308 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 POLR2FP61218 127 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 IL13RA1P78552 427 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 FMO1Q01740 532 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 FSTL1Q12841 308 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 STK4Q13043 487 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 TMEM132BQ14DG7 1078 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RABEP1Q15276 862 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 OASLQ15646 514 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF674Q2M3X9 581 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 MUM1Q2TAK8 710 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 FLYWCH1Q4VC44 716 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 SULT6B1Q6IMI4 303 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 LIN54Q6MZP7 749 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 TIGD7Q6NT04 549 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 NFRKBQ6P4R8 1299 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 KLHL17Q6TDP4 642 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 LRSAM1Q6UWE0 723 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 BBS12Q6ZW61 710 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 SESTD1Q86VW0 696 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 CXorf67Q86X51 503 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ARMC8Q8IUR7 673 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 CEP97Q8IW35 865 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 TAGAPQ8N103 731 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ADSSL1Q8N142 457 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 Q8N1X5 172 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 PPM1NQ8N819 430 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 KCTD6Q8NC69 237 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 MNS1Q8NEH6 495 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 OTUD7AQ8TE49 926 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 STON2Q8WXE9 905 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RIN2Q8WYP3 895 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 TBC1D5Q92609 795 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 HDAC10Q969S8 669 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 SDCCAG3Q96C92 435 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 C18orf8Q96DM3 657 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 IQCDQ96DY2 449 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 FAM120BQ96EK7 910 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 FAM167AQ96KS9 214 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 SLC2A13Q96QE2 648 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms