RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TRPM5Q9NZQ8 1165 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 SDK1Q7Z5N4 2213 aa17.21■□□□□ 0.35
DDR1-234ENST00000424544 ATG13O75143 517 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 SMC2O95347 1197 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 RETP07949 1114 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 TNNC1P63316 161 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 DLG4P78352 724 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 DPYDQ12882 1025 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 TAF10Q12962 218 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 SRSF5Q13243 272 aaKnown RBP17.2■□□□□ 0.34
DDR1-234ENST00000424544 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
DDR1-234ENST00000424544 RSPO4Q2I0M5 234 aaPredicted RBP17.2■□□□□ 0.34
DDR1-234ENST00000424544 GAB4Q2WGN9 574 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 ZACNQ401N2 412 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 WDR5BQ86VZ2 330 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 ADGRG2Q8IZP9 1017 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 P2RY13Q9BPV8 354 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 ELOVL4Q9GZR5 314 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 SDCBP2Q9H190 292 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 EHD2Q9NZN4 543 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 NXF1Q9UBU9 619 aaKnown RBP17.2■□□□□ 0.34
DDR1-234ENST00000424544 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 PCDHA5Q9Y5H7 936 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 WNT6Q9Y6F9 365 aa17.2■□□□□ 0.34
DDR1-234ENST00000424544 FAM92AA1XBS5 289 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 A8MXQ7 604 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 PRR5-ARHGAP8B1AHC4 643 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 TNFRSF10BO14763 440 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 IKBKBO14920 756 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 LRP3O75074 770 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 LETM1O95202 739 aaPredicted RBP17.19■□□□□ 0.34
DDR1-234ENST00000424544 OAS1P00973 400 aaKnown RBP17.19■□□□□ 0.34
DDR1-234ENST00000424544 ANXA13P27216 316 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 PDE6CP51160 858 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 ARHGAP8P85298 464 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 NCOA4Q13772 614 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 NFIL3Q16649 462 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 FBXO43Q4G163 708 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 SNX30Q5VWJ9 437 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 CRYBG2Q8N1P7 616 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 CPA6Q8N4T0 437 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 CAMKK1Q8N5S9 505 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 TMC2Q8TDI7 906 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 ATP2A3Q93084 1043 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 KCNK16Q96T55 309 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 SMYD3Q9H7B4 428 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 KIAA1468Q9P260 1216 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 NCOR2Q9Y618 2525 aa17.19■□□□□ 0.34
DDR1-234ENST00000424544 LEFTY2O00292 366 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 CLDN5O00501 218 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 MAPK13O15264 365 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 RNF40O75150 1001 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 RHOBTB3O94955 611 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 NR3C1P04150 777 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 RPN1P04843 607 aaKnown RBP17.18■□□□□ 0.34
DDR1-234ENST00000424544 LMNB2Q03252 620 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 KCNB1Q14721 858 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 LPAL2Q16609 132 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 SGSM1Q2NKQ1 1148 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
DDR1-234ENST00000424544 SV2AQ7L0J3 742 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 DGLUCYQ7Z3D6 616 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 FUKQ8N0W3 1084 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 NUP93Q8N1F7 819 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
DDR1-234ENST00000424544 CD101Q93033 1021 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
DDR1-234ENST00000424544 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 GMEB2Q9UKD1 530 aa17.18■□□□□ 0.34
DDR1-234ENST00000424544 SPTBN2O15020 2390 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 A0A0A0MRY4 1105 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 PHACTR2O75167 634 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
DDR1-234ENST00000424544 ZDHHC11BP0C7U3 371 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 SDHBP21912 280 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 OPRD1P41143 372 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 IFNAR2P48551 515 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
DDR1-234ENST00000424544 ZNF667Q5HYK9 610 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 RBM43Q6ZSC3 357 aaKnown RBP17.17■□□□□ 0.34
DDR1-234ENST00000424544 SYT13Q7L8C5 426 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 SPATA20Q8TB22 786 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 OVCA2Q8WZ82 227 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 TAF4BQ92750 862 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 ELMO3Q96BJ8 720 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 POLR3BQ9NW08 1133 aaPredicted RBP17.17■□□□□ 0.34
DDR1-234ENST00000424544 RAB23Q9ULC3 237 aa17.17■□□□□ 0.34
DDR1-234ENST00000424544 MED19A0JLT2 244 aaPredicted RBP17.16■□□□□ 0.34
DDR1-234ENST00000424544 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
DDR1-234ENST00000424544 YWHAQP27348 245 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 RAP1GAPP47736 663 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 ENPEPQ07075 957 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 SPEM2Q0P670 501 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 NR1H3Q13133 447 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 BIRC3Q13489 604 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms