RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 GIN1Q9NXP7 522 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 RNF14Q9UBS8 474 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 VAV3Q9UKW4 847 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 EMSYQ7Z589 1322 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 DLEC1Q9Y238 1755 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 GUCY1B2O75343 617 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 KRT10P13645 584 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 TM4SF4P48230 202 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 KRT31Q15323 416 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 NPY5RQ15761 445 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 TAF12Q16514 161 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 C10orf76Q5T2E6 689 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 KRT39Q6A163 491 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 IZUMO2Q6UXV1 221 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 RBM44Q6ZP01 1051 aaKnown RBP10.21□□□□□ -0.77
USP54-205ENST00000424265 RNF169Q8NCN4 708 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 ACAP3Q96P50 834 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 PCIF1Q9H4Z3 704 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 FAM207AQ9NSI2 230 aaPredicted RBP10.21□□□□□ -0.77
USP54-205ENST00000424265 LIMA1Q9UHB6 759 aaKnown RBP10.21□□□□□ -0.77
USP54-205ENST00000424265 TBX20Q9UMR3 447 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 SNX12Q9UMY4 172 aa10.21□□□□□ -0.77
USP54-205ENST00000424265 IGLV3-22A0A075B6J6 115 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ADCY6O43306 1168 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 FARP2O94887 1054 aaPredicted RBP10.21□□□□□ -0.78
USP54-205ENST00000424265 KRT6AP02538 564 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 KRT6BP04259 564 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ACTN1P12814 892 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 GNAZP19086 355 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 Q3C1V9 767 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 FYB2Q5VWT5 728 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 RRAGAQ7L523 313 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ZBTB33Q86T24 672 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 KCNN1Q92952 543 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 CENPTQ96BT3 561 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 LRRC37BQ96QE4 947 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 LBHD1Q9BQE6 289 aaPredicted RBP10.21□□□□□ -0.78
USP54-205ENST00000424265 RUSC1Q9BVN2 902 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 MYH8P13535 1937 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 PAPPA2Q9BXP8 1791 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 EXTL3O43909 919 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ZBED1O96006 694 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 HSD17B3P37058 310 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 RAP1GDS1P52306 607 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 TFAMQ00059 246 aaKnown RBP10.21□□□□□ -0.78
USP54-205ENST00000424265 PTK7Q13308 1070 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ANKDD1AQ495B1 522 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 BOLA3Q53S33 107 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ATF7IP2Q5U623 682 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 GPAT2Q6NUI2 795 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 PRR23CQ6ZRP0 262 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 RHOT2Q8IXI1 618 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 ANKK1Q8NFD2 765 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 IL31RAQ8NI17 732 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 TMEM134Q9H6X4 195 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 GCNT4Q9P109 453 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 SPEF1Q9Y4P9 236 aa10.21□□□□□ -0.78
USP54-205ENST00000424265 TCP11X1B4DZS4 312 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 KLRC1P26715 233 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 GRK4P32298 578 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 ZNF132P52740 706 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 NPEPPSP55786 919 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 AP2B1P63010 937 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 MRPS9P82933 396 aaKnown RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 RNASELQ05823 741 aaKnown RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 ZPBP2Q6X784 338 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 SAGE1Q9NXZ1 904 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 ZMYND8Q9ULU4 1186 aaPredicted RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 ARFGEF1Q9Y6D6 1849 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 CFAP69A5D8W1 941 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 SEPT4O43236 478 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 INSRRP14616 1297 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 CCNCP24863 283 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 ANXA13P27216 316 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 NMT1P30419 496 aaKnown RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 GTF2H1P32780 548 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 COL19A1Q14993 1142 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 DUOXA2Q1HG44 320 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 ARL13BQ3SXY8 428 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 DEPDC1Q5TB30 811 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 ABHD15Q6UXT9 468 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 SYCE1Q8N0S2 351 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 PPM1KQ8N3J5 372 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 CAAP1Q9H8G2 361 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 XAB2Q9HCS7 855 aaKnown RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 UBN1Q9NPG3 1134 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 METTL5Q9NRN9 209 aaKnown RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 SRRDQ9UH36 339 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP54-205ENST00000424265 TMCC2O75069 709 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 SEC24DO94855 1032 aaPredicted RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 CD4P01730 458 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
USP54-205ENST00000424265 ARID5AQ03989 594 aa10.2□□□□□ -0.78
USP54-205ENST00000424265 RELAQ04206 551 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms