RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SYAP1Q96A49 352 aaPredicted RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 CGNQ9P2M7 1197 aaKnown RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 NXF1Q9UBU9 619 aaKnown RBP17.2■□□□□ 0.34
COL18A1-205ENST00000423214 CPQQ9Y646 472 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 PI4KAP42356 2102 aa17.2■□□□□ 0.34
COL18A1-205ENST00000423214 SLC9A3R1O14745 358 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-205ENST00000423214 CST3P01034 146 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-205ENST00000423214 PTPN1P18031 435 aaKnown RBP17.19■□□□□ 0.34
COL18A1-205ENST00000423214 BIRC3Q13489 604 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 PLK5Q496M5 336 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 FILIP1Q7Z7B0 1213 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 DDX42Q86XP3 938 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL18A1-205ENST00000423214 B3GALNT2Q8NCR0 500 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 EZH1Q92800 747 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-205ENST00000423214 ZC3H10Q96K80 434 aaKnown RBP17.19■□□□□ 0.34
COL18A1-205ENST00000423214 LINC00597Q9H2U6 94 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 DPEP3Q9H4B8 488 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 SLC39A2Q9NP94 309 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 VPS45Q9NRW7 570 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 SMPD4Q9NXE4 827 aa17.19■□□□□ 0.34
COL18A1-205ENST00000423214 LAMA1P25391 3075 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 ZNF840PA6NDX5 716 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 EXOC3O60645 756 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 STAU1O95793 577 aaKnown RBP17.18■□□□□ 0.34
COL18A1-205ENST00000423214 CYP17A1P05093 508 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 FAM163BP0C2L3 166 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 MBL2P11226 248 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-205ENST00000423214 CASP1P29466 404 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 ATICP31939 592 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 OPRD1P41143 372 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 ME1P48163 572 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 MYL6P60660 151 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 SLC7A9P82251 487 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 EHHADHQ08426 723 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 TAF10Q12962 218 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 ZNF699Q32M78 642 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 C2orf27AQ580R0 203 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 SCARA5Q6ZMJ2 495 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 PDZD8Q8NEN9 1154 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 FBXO32Q969P5 355 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 MED10Q9BTT4 135 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 TPSD1Q9BZJ3 242 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 SMOC1Q9H4F8 434 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 EBF1Q9UH73 591 aa17.18■□□□□ 0.34
COL18A1-205ENST00000423214 CLDN5O00501 218 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 RTN3O95197 1032 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-205ENST00000423214 ADH1CP00326 375 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 OAS1P00973 400 aaKnown RBP17.17■□□□□ 0.34
COL18A1-205ENST00000423214 YWHAQP27348 245 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 AFMP43652 599 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 CACNA2D1P54289 1103 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 ZXDBP98169 803 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 CREB5Q02930 508 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 KNOP1Q1ED39 458 aaKnown RBP17.17■□□□□ 0.34
COL18A1-205ENST00000423214 BMT2Q1RMZ1 405 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 PLA2G2CQ5R387 149 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 FAM35AQ86V20 835 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 C11orf74Q86VG3 221 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 TTC30AQ86WT1 665 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 C12orf56Q8IXR9 622 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 KIAA1958Q8N8K9 716 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 GOLGA5Q8TBA6 731 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 USP33Q8TEY7 942 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 DUSP15Q9H1R2 295 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-205ENST00000423214 SMYD3Q9H7B4 428 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 CFAP97Q9P2B7 532 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 NME7Q9Y5B8 376 aa17.17■□□□□ 0.34
COL18A1-205ENST00000423214 KMT2BQ9UMN6 2715 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-205ENST00000423214 PVALEFA0A1B0GWK0 134 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
COL18A1-205ENST00000423214 DCLK1O15075 740 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 OLFM2O95897 454 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 F13A1P00488 732 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 APODP05090 189 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 ZSCAN22P10073 491 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-205ENST00000423214 CUL4BQ13620 913 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 PKP1Q13835 747 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 USP39Q53GS9 565 aaKnown RBP17.16■□□□□ 0.34
COL18A1-205ENST00000423214 ZNF667Q5HYK9 610 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 STPG1Q5TH74 334 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 RNF43Q68DV7 783 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 ANO7Q6IWH7 933 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 NUP93Q8N1F7 819 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 OVCA2Q8WZ82 227 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 EDEM2Q9BV94 578 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 B3GNT5Q9BYG0 378 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 XYLT2Q9H1B5 865 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 RXFP3Q9NSD7 469 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 EXOC1Q9NV70 894 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 TMEM30AQ9NV96 361 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 MMP17Q9ULZ9 603 aa17.16■□□□□ 0.34
COL18A1-205ENST00000423214 K7EQS6 105 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 ALDH1A2O94788 518 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 ADH5P11766 374 aa17.15■□□□□ 0.34
COL18A1-205ENST00000423214 PDIA4P13667 645 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms