RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 GRAP2O75791 330 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 ECM2O94769 699 aaPredicted RBP14.43□□□□□ -0.1
CDCA3-202ENST00000422785 KIAA0754O94854 1291 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 RDXP35241 583 aaKnown RBP14.43□□□□□ -0.1
CDCA3-202ENST00000422785 CDH6P55285 790 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 EIF3EP60228 445 aaKnown RBP14.43□□□□□ -0.1
CDCA3-202ENST00000422785 FBXO47Q5MNV8 452 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 CENPUQ71F23 418 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 ZDHHC17Q8IUH5 632 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 SEC16BQ96JE7 1060 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 PRMT1Q99873 361 aaKnown RBP14.43□□□□□ -0.1
CDCA3-202ENST00000422785 APOL6Q9BWW8 343 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 PHACTR1Q9C0D0 580 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 GJD2Q9UKL4 321 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 Q9Y3F1 56 aa14.43□□□□□ -0.1
CDCA3-202ENST00000422785 PDCD11Q14690 1871 aaKnown RBP14.43□□□□□ -0.1
CDCA3-202ENST00000422785 SMIM28A0A1B0GU29 152 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 IGF2BP3O00425 579 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDCA3-202ENST00000422785 MCF2LO15068 1137 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CTCFP49711 727 aaPredicted RBP14.42□□□□□ -0.1
CDCA3-202ENST00000422785 TFDP2Q14188 446 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 DPYSL3Q14195 570 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 BOLA3Q53S33 107 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 FAM47CQ5HY64 1035 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 GKAP1Q5VSY0 366 aaPredicted RBP14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CST9Q5W186 159 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CYP4X1Q8N118 509 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 KHSRPQ92945 711 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDCA3-202ENST00000422785 C10orf88Q9H8K7 445 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 TMEM120BA0PK00 339 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 A8MXQ7 604 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 MYL3P08590 195 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 KCNE1P15382 129 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 RPL22P35268 128 aaKnown RBP14.42□□□□□ -0.1
CDCA3-202ENST00000422785 PDK2Q15119 407 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CCL14Q16627 93 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CDO1Q16878 200 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 RAB6CQ53S08 254 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 VSTM1Q6UX27 236 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 MAP7D3Q8IWC1 876 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 UNC45BQ8IWX7 931 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 SCUBE3Q8IX30 993 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CRYBG2Q8N1P7 616 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 SPATA18Q8TC71 538 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 TEKT4Q8WW24 435 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 CPT1BQ92523 772 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 RAB6CQ9H0N0 254 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 AP5M1Q9H0R1 490 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 RRAGCQ9HB90 399 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 GDAP2Q9NXN4 497 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 ACTL7BQ9Y614 415 aa14.42□□□□□ -0.1
CDCA3-202ENST00000422785 PAPSS1O43252 624 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 XPOTO43592 962 aaKnown RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 RBP3P10745 1247 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 SDC4P31431 198 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 PNPLA4P41247 253 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 CRYBB1P53674 252 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 HUNKP57058 714 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 FASTKD3Q14CZ7 662 aaKnown RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 UBXN11Q5T124 520 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 CACNA2D3Q8IZS8 1091 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 ZNF560Q96MR9 790 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 TBCBQ99426 244 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 NCAPGQ9BPX3 1015 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 RASSF4Q9H2L5 321 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 EXOC1LA0A1B0GW35 172 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 KPNA7A9QM74 516 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 SMAPO00193 183 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 GABBR2O75899 941 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 CREB1P16220 341 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 DESP17661 470 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 STIP1P31948 543 aaKnown RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 ATP11AP98196 1134 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 PDIA2Q13087 525 aaKnown RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 TAF1CQ15572 869 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-202ENST00000422785 HIF1AQ16665 826 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 TDRPQ86YL5 185 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 ZBED8Q8IZ13 594 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 NME8Q8N427 588 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 OTUD6BQ8N6M0 293 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 NAT8LQ8N9F0 302 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 ANKRD52Q8NB46 1076 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 KBTBD7Q8WVZ9 684 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 KATNAL1Q9BW62 490 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 DPEP3Q9H4B8 488 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 RNF19AQ9NV58 838 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 KLK14Q9P0G3 267 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 TBK1Q9UHD2 729 aa14.41□□□□□ -0.1
CDCA3-202ENST00000422785 C17orf102A2RUQ5 167 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 GNL1P36915 607 aaPredicted RBP14.4□□□□□ -0.1
CDCA3-202ENST00000422785 BEX3Q00994 111 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 IFT88Q13099 833 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 KRT81Q14533 505 aa14.4□□□□□ -0.1
CDCA3-202ENST00000422785 LIMS2Q7Z4I7 341 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms