RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 KRT17Q04695 432 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 CCDC14Q49A88 953 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 CFAP58Q5T655 872 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 DCLRE1AQ6PJP8 1040 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 MAP7D3Q8IWC1 876 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 IQCKQ8N0W5 287 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 CCDC89Q8N998 374 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 C3orf58Q8NDZ4 430 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 TRIM31Q9BZY9 425 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 ZWILCHQ9H900 591 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 GABBR2O75899 941 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 POMCP01189 267 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 FAM200BP0CF97 657 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 ITIH2P19823 946 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 TKTP29401 623 aaKnown RBP17.59■□□□□ 0.41
SSBP3-205ENST00000417664 FAM193AP78312 1265 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 CAV1Q03135 178 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 CALCOCO2Q13137 446 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 MBTPS1Q14703 1052 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 LLGL1Q15334 1064 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 TIGD5Q53EQ6 642 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 LRRC8DQ7L1W4 858 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 ANKS1BQ7Z6G8 1248 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 KCTD6Q8NC69 237 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 TSEN2Q8NCE0 465 aaKnown RBP17.59■□□□□ 0.41
SSBP3-205ENST00000417664 BBOF1Q8ND07 529 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 ATG4AQ8WYN0 398 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 PIWIL1Q96J94 861 aaKnown RBP17.59■□□□□ 0.41
SSBP3-205ENST00000417664 LPIN3Q9BQK8 851 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 ACBD6Q9BR61 282 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 TSPYL1Q9H0U9 437 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 NEUROG2Q9H2A3 272 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-205ENST00000417664 KLHL11Q9NVR0 708 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 GRHL1Q9NZI5 618 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 R3HDM2Q9Y2K5 976 aaKnown RBP17.59■□□□□ 0.41
SSBP3-205ENST00000417664 SNX24Q9Y343 169 aa17.59■□□□□ 0.41
SSBP3-205ENST00000417664 TDRD15B5MCY1 1934 aaKnown RBP17.59■□□□□ 0.41
SSBP3-205ENST00000417664 ZNF487B1APH4 448 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 H3BQF6 201 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 PIK3R2O00459 728 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 LIASO43766 372 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 ENDOD1O94919 500 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 FBXO21O94952 628 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 KRT10P13645 584 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 RPL21P46778 160 aaKnown RBP17.58■□□□□ 0.41
SSBP3-205ENST00000417664 GABPB1Q06547 395 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-205ENST00000417664 SNX1Q13596 522 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.41
SSBP3-205ENST00000417664 PDK2Q15119 407 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 MDH1BQ5I0G3 518 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 KAZNQ674X7 775 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 TRNP1Q6NT89 227 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 LRIG3Q6UXM1 1119 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 PAQR9Q6ZVX9 377 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 BBS12Q6ZW61 710 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 ZNF365Q70YC5 407 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 TMC3Q7Z5M5 1100 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 PIGZQ86VD9 579 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 MYCBPAPQ8TBZ2 947 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 URGCPQ8TCY9 931 aa17.58■□□□□ 0.41
SSBP3-205ENST00000417664 CENPIQ92674 756 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-205ENST00000417664 NKD2Q969F2 451 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-205ENST00000417664 ELAC1Q9H777 363 aaKnown RBP17.58■□□□□ 0.41
SSBP3-205ENST00000417664 AGPSO00116 658 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 PITPNM1O00562 1244 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 NDC80O14777 642 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 MDM4O15151 490 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 ATP2C2O75185 946 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 PPFIA2O75334 1257 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 TYMPP19971 482 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 YY1P25490 414 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 GGCXP38435 758 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 PLTPP55058 493 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 SMTNL2Q2TAL5 461 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 RTN4RL1Q86UN2 441 aaPredicted RBP17.58■□□□□ 0.4
SSBP3-205ENST00000417664 FAM126BQ8IXS8 530 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 ART4Q93070 314 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 SUSD3Q96L08 255 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 CCDC114Q96M63 670 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 CFAP57Q96MR6 1250 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 SH3GL2Q99962 352 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 MED10Q9BTT4 135 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 C11orf84Q9BUA3 381 aaPredicted RBP17.58■□□□□ 0.4
SSBP3-205ENST00000417664 DDX23Q9BUQ8 820 aaKnown RBP17.58■□□□□ 0.4
SSBP3-205ENST00000417664 B3GNT5Q9BYG0 378 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 LRRC4Q9HBW1 653 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 CRTAC1Q9NQ79 661 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 PCSK1NQ9UHG2 260 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 INPP5FQ9Y2H2 1132 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 NEU2Q9Y3R4 380 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 HTTP42858 3142 aa17.58■□□□□ 0.4
SSBP3-205ENST00000417664 TMEM189-UBE2V1I3L0A0 370 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 GRAP2O75791 330 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 SYF2O95926 243 aaKnown RBP17.57■□□□□ 0.4
SSBP3-205ENST00000417664 LCP1P13796 627 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 ACAT1P24752 427 aaKnown RBP17.57■□□□□ 0.4
SSBP3-205ENST00000417664 TFDP2Q14188 446 aa17.57■□□□□ 0.4
SSBP3-205ENST00000417664 MAPRE1Q15691 268 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms