RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 XYLT2Q9H1B5 865 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 SMPD4Q9NXE4 827 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 EBF1Q9UH73 591 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 CPQQ9Y646 472 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 CLDN5O00501 218 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 SLC9A3R1O14745 358 aaPredicted RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 OAS1P00973 400 aaKnown RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 CYP17A1P05093 508 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 HSP90AA1P07900 732 aaKnown RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 OPRD1P41143 372 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 AFMP43652 599 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 DGKEP52429 567 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 CACNA2D1P54289 1103 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 BIRC3Q13489 604 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 CUL4BQ13620 913 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 FILIP1Q7Z7B0 1213 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 GOLGA5Q8TBA6 731 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 USP33Q8TEY7 942 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 B3GNT5Q9BYG0 378 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 VPS45Q9NRW7 570 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 TMEM30AQ9NV96 361 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 PCDHA7Q9UN72 937 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 ZNF638Q14966 1978 aaKnown RBP15.35■□□□□ 0.05
PAF1-202ENST00000416728 ATP8B3O60423 1300 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 DCLK1O15075 740 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 RHOBTB1O94844 696 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 MBL2P11226 248 aaPredicted RBP15.35■□□□□ 0.05
PAF1-202ENST00000416728 YWHAQP27348 245 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 GBP1P32455 592 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 CASP4P49662 377 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 SEC13P55735 322 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 ZNF699Q32M78 642 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 C2orf27AQ580R0 203 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 PLA2G2CQ5R387 149 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 RESP18Q5W5W9 173 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 DDX42Q86XP3 938 aaKnown RBP eCLIP15.35■□□□□ 0.05
PAF1-202ENST00000416728 CEP57L1Q8IYX8 460 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 ADGRG2Q8IZP9 1017 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 NUP93Q8N1F7 819 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 PDZD8Q8NEN9 1154 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 SNX21Q969T3 373 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 DUSP15Q9H1R2 295 aaPredicted RBP15.35■□□□□ 0.05
PAF1-202ENST00000416728 SMOC1Q9H4F8 434 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 VRTNQ9H8Y1 702 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 RXFP3Q9NSD7 469 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 CFAP97Q9P2B7 532 aa15.35■□□□□ 0.05
PAF1-202ENST00000416728 K7EQS6 105 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 SCAMP3O14828 347 aaKnown RBP15.34■□□□□ 0.05
PAF1-202ENST00000416728 RTN3O95197 1032 aaPredicted RBP15.34■□□□□ 0.05
PAF1-202ENST00000416728 F13A1P00488 732 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 AP3M2P53677 418 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 DHCR24Q15392 516 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 GAB4Q2WGN9 574 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 ZNF667Q5HYK9 610 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 ATL3Q6DD88 541 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 HSCBQ8IWL3 235 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 PLEKHO2Q8TD55 490 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 OVCA2Q8WZ82 227 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 FBXO32Q969P5 355 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 TNIP3Q96KP6 325 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 MED10Q9BTT4 135 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 SMYD3Q9H7B4 428 aa15.34■□□□□ 0.05
PAF1-202ENST00000416728 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 LRRIQ3A6PVS8 624 aaPredicted RBP15.33■□□□□ 0.04
PAF1-202ENST00000416728 ADH1CP00326 375 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 EIF2DP41214 584 aaKnown RBP15.33■□□□□ 0.04
PAF1-202ENST00000416728 CDH8P55286 799 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 CREB5Q02930 508 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 NCOA4Q13772 614 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 USP39Q53GS9 565 aaKnown RBP15.33■□□□□ 0.04
PAF1-202ENST00000416728 STPG1Q5TH74 334 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 ANO7Q6IWH7 933 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 SCARA5Q6ZMJ2 495 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 FAM35AQ86V20 835 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 C11orf74Q86VG3 221 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 GRAMD1CQ8IYS0 662 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 CCDC33Q8N5R6 958 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 PARD3BQ8TEW8 1205 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 KCNK16Q96T55 309 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 TPSD1Q9BZJ3 242 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 DMAP1Q9NPF5 467 aaPredicted RBP15.33■□□□□ 0.04
PAF1-202ENST00000416728 EXOC1Q9NV70 894 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 TBC1D14Q9P2M4 693 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 MMP17Q9ULZ9 603 aa15.33■□□□□ 0.04
PAF1-202ENST00000416728 CAVIN2O95810 425 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 SLFN14P0C7P3 912 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 SLC5A3P53794 718 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 CLDN10P78369 228 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 MRPS21P82921 87 aaKnown RBP15.32■□□□□ 0.04
PAF1-202ENST00000416728 CRY1Q16526 586 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 TCEAL6Q6IPX3 200 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 RHBDF2Q6PJF5 856 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 RASSF3Q86WH2 238 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 TCEAL3Q969E4 200 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 SMARCD1Q96GM5 515 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 CNOT6LQ96LI5 555 aaKnown RBP15.32■□□□□ 0.04
PAF1-202ENST00000416728 PNKPQ96T60 521 aa15.32■□□□□ 0.04
PAF1-202ENST00000416728 SERTAD1Q9UHV2 236 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms