RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 CFHP08603 1231 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 SRGAP2CP0DJJ0 459 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 BMP1P13497 986 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 POLR2BP30876 1174 aaKnown RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 CD52P31358 61 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 GSCP56915 257 aaPredicted RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 NFX1Q12986 1120 aaKnown RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 SNX1Q13596 522 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 ERMARDQ5T6L9 678 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 TADA2BQ86TJ2 420 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 IFNLR1Q8IU57 520 aaPredicted RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 RAPGEF5Q92565 580 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 CCDC114Q96M63 670 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 XPO6Q96QU8 1125 aaKnown RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 UHRF1Q96T88 793 aaPredicted RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 FRMD8P1Q9BZ68 369 aaPredicted RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 CDC42EP4Q9H3Q1 356 aaKnown RBP15.57■□□□□ 0.08
USP4-203ENST00000415188 CCDC134Q9H6E4 229 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 ANAPC5Q9UJX4 755 aa15.57■□□□□ 0.08
USP4-203ENST00000415188 TTLL13PA6NNM8 815 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 ENPP3O14638 875 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 MAGEB2O15479 319 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 MEFVO15553 781 aaPredicted RBP15.56■□□□□ 0.08
USP4-203ENST00000415188 TJP3O95049 919 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 CST3P01034 146 aaPredicted RBP15.56■□□□□ 0.08
USP4-203ENST00000415188 FGFR4P22455 802 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 PHKA2P46019 1235 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 PPP1R15BQ5SWA1 713 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 MTHFD1LQ6UB35 978 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 POLNQ7Z5Q5 900 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 IPO4Q8TEX9 1081 aaKnown RBP15.56■□□□□ 0.08
USP4-203ENST00000415188 SLITRK1Q96PX8 696 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 HERPUD2Q9BSE4 406 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 XYLT2Q9H1B5 865 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
USP4-203ENST00000415188 PPANQ9NQ55 473 aaKnown RBP15.56■□□□□ 0.08
USP4-203ENST00000415188 AAASQ9NRG9 546 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 LMCD1Q9NZU5 365 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 WDR35Q9P2L0 1181 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 EFR3BQ9Y2G0 817 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 TRPV2Q9Y5S1 764 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 COL1A2P08123 1366 aa15.56■□□□□ 0.08
USP4-203ENST00000415188 TCF20Q9UGU0 1960 aaKnown RBP15.55■□□□□ 0.08
USP4-203ENST00000415188 TP73O15350 636 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 TTC4O95801 387 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 KRT1P04264 644 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 MCF2P10911 925 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 BRD2P25440 801 aaKnown RBP15.55■□□□□ 0.08
USP4-203ENST00000415188 TMOD1P28289 359 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 ATICP31939 592 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 ADCY8P40145 1251 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 ASPAP45381 313 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 ITGA8P53708 1063 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 SEC24CP53992 1094 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 TFAMQ00059 246 aaKnown RBP15.55■□□□□ 0.08
USP4-203ENST00000415188 MBTD1Q05BQ5 628 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 AUHQ13825 339 aaKnown RBP15.55■□□□□ 0.08
USP4-203ENST00000415188 SEZ6Q53EL9 994 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 LLGL2Q6P1M3 1020 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 DCUN1D2Q6PH85 259 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 ERICH1Q86X53 443 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 RHPN2Q8IUC4 686 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 LRRC71Q8N4P6 559 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 FNIP1Q8TF40 1166 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 ATG4AQ8WYN0 398 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 P3H4Q92791 437 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 HLA-CQ95604 372 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 BCO2Q9BYV7 579 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 CDT1Q9H211 546 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 CYP3A43Q9HB55 503 aa15.55■□□□□ 0.08
USP4-203ENST00000415188 DRG1Q9Y295 367 aaKnown RBP15.55■□□□□ 0.08
USP4-203ENST00000415188 R3HDM2Q9Y2K5 976 aaKnown RBP15.55■□□□□ 0.08
USP4-203ENST00000415188 SMIM35A0A1B0GVV1 85 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 TLDC2A0PJX2 215 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 TRIM66O15016 1216 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 ABHD2P08910 425 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 SSR1P43307 286 aaKnown RBP15.54■□□□□ 0.08
USP4-203ENST00000415188 AAK1Q2M2I8 961 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 ZNF667Q5HYK9 610 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 CCDC25Q86WR0 208 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 TMEM192Q8IY95 271 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 TTC39CQ8N584 583 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 OTUD6BQ8N6M0 293 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 CHMP6Q96FZ7 201 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 RABEP2Q9H5N1 569 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 VRTNQ9H8Y1 702 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 USTQ9Y2C2 406 aa15.54■□□□□ 0.08
USP4-203ENST00000415188 COL4A6Q14031 1691 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 INO80B-WBP1J3KQ70 363 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 M0QZ92 97 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 LIASO43766 372 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 C22orf31O95567 290 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 P4HA1P13674 534 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 KLRC2P26717 231 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 GPM6BQ13491 265 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 TMEM132AQ24JP5 1023 aa15.53■□□□□ 0.08
USP4-203ENST00000415188 C2CD6Q53TS8 623 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms