RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CPA2P48052 419 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 NEK3P51956 506 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ARFIP2P53365 341 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ZNF280AP59817 542 aaPredicted RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 TMEM132BQ14DG7 1078 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 PRKD1Q15139 912 aaPredicted RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 IER5Q5VY09 327 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SH2D5Q6ZV89 423 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 LMNTD2Q8IXW0 634 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 EXOC8Q8IYI6 725 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SCYL3Q8IZE3 742 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ARFGAP1Q8N6T3 406 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 KCTD6Q8NC69 237 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SLC44A1Q8WWI5 657 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 APOPT1Q96IL0 206 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ACO2Q99798 780 aaKnown RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 RSAD1Q9HA92 442 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 SPATS2LQ9NUQ6 558 aaKnown RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 ARMCX1Q9P291 453 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 HEY2Q9UBP5 337 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 ZNF112Q9UJU3 913 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 CPSF3Q9UKF6 684 aaKnown RBP10.23□□□□□ -0.77
CD44-206ENST00000415148 IKBKGQ9Y6K9 419 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 UTRNP46939 3433 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 DOCK1Q14185 1865 aa10.23□□□□□ -0.77
CD44-206ENST00000415148 GAS2O43903 313 aaKnown RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 TBX10O75333 385 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 LGR5O75473 907 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 HAUS5O94927 633 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 IL1R2P27930 398 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 SERPINB3P29508 390 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TNFSF9P41273 254 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 GABRB2P47870 512 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 EIF3EP60228 445 aaKnown RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 MXRA7P84157 204 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CDK16Q00536 496 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CDK18Q07002 472 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TSNAXIP1Q2TAA8 658 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CYP4A22Q5TCH4 519 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 DCAF15Q66K64 600 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 OR52E8Q6IFG1 317 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 IGDCC3Q8IVU1 814 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 UNC45BQ8IWX7 931 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TRIM42Q8IWZ5 723 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ZNF395Q9H8N7 513 aaPredicted RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 ZWILCHQ9H900 591 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ARHGEF4Q9NR80 690 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 STOML1Q9UBI4 398 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 MCF2LO15068 1137 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CHADO15335 359 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 NVLO15381 856 aaKnown RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 GSC2O15499 205 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 B4GALT4O60513 344 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 RNF8O76064 485 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ENDOD1O94919 500 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TNNC2P02585 160 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 AMPD1P23109 780 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ASPAP45381 313 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 DYNLT1P63172 113 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 MRPS35P82673 323 aaKnown RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 ZNF200P98182 395 aaPredicted RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 MUM1Q2TAK8 710 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ZNF699Q32M78 642 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 BBS9Q3SYG4 887 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 HSF5Q4G112 596 aaPredicted RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 PTPN20Q4JDL3 420 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 SEZ6Q53EL9 994 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ZNF394Q53GI3 561 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 FAM47CQ5HY64 1035 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 SNX30Q5VWJ9 437 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 FAM160B1Q5W0V3 765 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CES4AQ5XG92 561 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 DENND1BQ6P3S1 775 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CATSPERGQ6ZRH7 1159 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 RFX6Q8HWS3 928 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.22□□□□□ -0.77
CD44-206ENST00000415148 SLC4A11Q8NBS3 891 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 JOSD2Q8TAC2 188 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TEKT4Q8WW24 435 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 SCG3Q8WXD2 468 aaKnown RBP10.22□□□□□ -0.77
CD44-206ENST00000415148 SKA1Q96BD8 255 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TCHPQ9BT92 498 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 XYLT2Q9H1B5 865 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 HOXC10Q9NYD6 342 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 CNTN3Q9P232 1028 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ZNF180Q9UJW8 692 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 C2CD2Q9Y426 696 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 ASB3Q9Y575 518 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 TEX264Q9Y6I9 313 aa10.22□□□□□ -0.77
CD44-206ENST00000415148 LOC285556D6RIA3 1793 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 SMIM24O75264 130 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 TMEM63AO94886 807 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 TRUB2O95900 331 aaKnown RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 ATP5BP06576 529 aaKnown RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 INHBAP08476 426 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms