RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GLG1Q92896 1179 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZDHHC12Q96GR4 267 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 SORCS2Q96PQ0 1159 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 TMPRSS5Q9H3S3 457 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 GLOD4Q9HC38 313 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 TRIM36Q9NQ86 728 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 HEYLQ9NQ87 328 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 SERTAD4Q9NUC0 356 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 DKK3Q9UBP4 350 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 GABRQQ9UN88 632 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 DMRT1Q9Y5R6 373 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 WDR33Q9C0J8 1336 aaKnown RBP4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 A1L4Q6 167 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 RGS10O43665 173 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 ORC4O43929 436 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 HARSP12081 509 aaKnown RBP4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 EPHA3P29320 983 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 PRKAR1BP31321 381 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 UQCRC1P31930 480 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 LIPAP38571 399 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 TGFB2P61812 414 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 SIM1P81133 766 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 FSTL1Q12841 308 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 EIF2B5Q13144 721 aaKnown RBP4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 SLC35G1Q2M3R5 365 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 PRR16Q569H4 304 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 TREML2Q5T2D2 321 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 DEPDC1Q5TB30 811 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 MANEALQ5VSG8 457 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 XRRA1Q6P2D8 792 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 KRT73Q86Y46 540 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 RP9Q8TA86 221 aaKnown RBP4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 TMEM171Q8WVE6 324 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 FAM227BQ96M60 508 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 SELENOOQ9BVL4 669 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 MAGEB5Q9BZ81 275 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZCWPW1Q9H0M4 648 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 CERS4Q9HA82 394 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 TBC1D23Q9NUY8 699 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 VPS51Q9UID3 782 aa4.57□□□□□ -1.68
HMGB1P11-201ENST00000413899 LINC00473A8K010 186 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 GCOM1H8Y6P7 765 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 M0R3H8 397 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ERBB2P04626 1255 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ELFN1P0C7U0 828 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 NR2F6P10588 404 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 JUPP14923 745 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 EEF1GP26641 437 aaKnown RBP4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 GABRB3P28472 473 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 HSPA7P48741 367 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ALDH9A1P49189 494 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 CLCN2P51788 898 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 TIRAPP58753 221 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 LY6KQ17RY6 165 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 MPEG1Q2M385 716 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 RRAGBQ5VZM2 374 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 SLC9A4Q6AI14 798 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 KIAA0408Q6ZU52 694 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 WDR53Q7Z5U6 358 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 RAB11FIP4Q86YS3 637 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 SPICE1Q8N0Z3 855 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ACRBPQ8NEB7 543 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 KIAA1191Q96A73 305 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 CHFRQ96EP1 664 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 SNX27Q96L92 541 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 C17orf80Q9BSJ5 609 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 VN1R3Q9BXE9 311 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 INO80BQ9C086 356 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 IKZF4Q9H2S9 585 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 SYNPO2LQ9H987 977 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZBTB26Q9HCK0 441 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ARHGEF3Q9NR81 526 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 GJB4Q9NTQ9 266 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 DNAJB11Q9UBS4 358 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 HPSEQ9Y251 543 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 ENTPD2Q9Y5L3 495 aa4.56□□□□□ -1.68
HMGB1P11-201ENST00000413899 HNRNPDLO14979 420 aaKnown RBP4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 PLA2G6O60733 806 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 TTLL1O95922 423 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 LMNAP02545 664 aaKnown RBP4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 PRKCBP05771 671 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 FESP07332 822 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 SETSIPP0DME0 302 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 SLC5A2P31639 672 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 CXCR5P32302 372 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 PLA2G5P39877 138 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 ITGA8P53708 1063 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 CACNA2D1P54289 1103 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 KCNAB1Q14722 419 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 ERCC6LQ2NKX8 1250 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 MTHFD1LQ6UB35 978 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 OLFML1Q6UWY5 402 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 GRASPQ7Z6J2 395 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 TXLNBQ8N3L3 684 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 SIMC1Q8NDZ2 872 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 R3HDM4Q96D70 268 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 AGAP2Q99490 1192 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 TIMP4Q99727 224 aa4.55□□□□□ -1.68
HMGB1P11-201ENST00000413899 STK33Q9BYT3 514 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms