RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TM7SF2O76062 418 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 MMP10P09238 476 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 STIP1P31948 543 aaKnown RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 EIF3EP60228 445 aaKnown RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 BASP1P80723 227 aaKnown RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 ZBTB41Q5SVQ8 909 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 FAM83AQ86UY5 434 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 MYLK4Q86YV6 388 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 IGDCC3Q8IVU1 814 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 RAB3IL1Q8TBN0 382 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 SRPK1Q96SB4 655 aaKnown RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 NIF3L1Q9GZT8 377 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 ZWILCHQ9H900 591 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 GPAMQ9HCL2 828 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 ETAA1Q9NY74 926 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 SIP14410 1827 aa18.39■□□□□ 0.54
SDCBP-202ENST00000413219 FAM237BA0A1B0GVD1 139 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 KBTBD13C9JR72 458 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 NR3C2P08235 984 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 IL1R2P27930 398 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 RFC1P35251 1148 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-202ENST00000413219 TGFB2P61812 414 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 RSBN1LQ6PCB5 846 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-202ENST00000413219 WDR49Q8IV35 697 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 CCDC60Q8IWA6 550 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-202ENST00000413219 SCUBE1Q8IWY4 988 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 KBTBD2Q8IY47 623 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 ARHGAP18Q8N392 663 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 ARFGAP1Q8N6T3 406 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 FAM71DQ8N9W8 422 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 DEPTORQ8TB45 409 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 FGD4Q96M96 766 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 PORCNQ9H237 461 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 CISHQ9NSE2 258 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 TAGLN3Q9UI15 199 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 PLA2G4CQ9UP65 541 aa18.39■□□□□ 0.53
SDCBP-202ENST00000413219 MYH9P35579 1960 aaKnown RBP18.39■□□□□ 0.53
SDCBP-202ENST00000413219 SPECC1L-ADORA2AF8WAN1 911 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 H0YIN7 160 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CHADO15335 359 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 KRT37O76014 449 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 SNRPAP09012 282 aaKnown RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 KRT3P12035 628 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 ANPEPP15144 967 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 AMPD1P23109 780 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CCNFP41002 786 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 KCNJ11Q14654 390 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CYP4A22Q5TCH4 519 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 ANGEL2Q5VTE6 544 aaKnown RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 ABHD15Q6UXT9 468 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 ALYREFQ86V81 257 aaKnown RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 BRSK2Q8IWQ3 736 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 TARS2Q9BW92 718 aaKnown RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 TMEM39BQ9GZU3 492 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 JPH1Q9HDC5 661 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 PLLPQ9Y342 182 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CTDP1Q9Y5B0 961 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 WASF2Q9Y6W5 498 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 E5RJQ4 531 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 RBP3P10745 1247 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 ACTR3P61158 418 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 YWHAGP61981 247 aaKnown RBP eCLIP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 YWHAEP62258 255 aaKnown RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 AP2B1P63010 937 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 BIRC2Q13490 618 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 SMTNL2Q2TAL5 461 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 MTERF2Q49AM1 385 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 LGSNQ5TDP6 509 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 FOXB2Q5VYV0 432 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 RFX6Q8HWS3 928 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CDAN1Q8IWY9 1227 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 RBM15BQ8NDT2 890 aaKnown RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 PHC3Q8NDX5 983 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CMASQ8NFW8 434 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-202ENST00000413219 CDHR1Q96JP9 859 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 C1orf21Q9H246 121 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 TMEM134Q9H6X4 195 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 SIRPGQ9P1W8 387 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 ARMCX1Q9P291 453 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 FBXO40Q9UH90 709 aa18.38■□□□□ 0.53
SDCBP-202ENST00000413219 C2orf71A6NGG8 1288 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 TRIM49D1C9J1S8 452 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 H3BRJ5 948 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ATG7O95352 703 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 C1QAP02745 245 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 WEE2P0C1S8 567 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ARL2P36404 184 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 PSMC4P43686 418 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ACTR2P61160 394 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 KYAT3Q6YP21 454 aaKnown RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 TREML1Q86YW5 311 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 E2F7Q96AV8 911 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 GBP5Q96PP8 586 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ASCC2Q9H1I8 757 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 LHX5Q9H2C1 402 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 PSME4Q14997 1843 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 LRRIQ4A6NIV6 560 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms