RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 TTC9BQ8N6N2 239 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 CADM4Q8NFZ8 388 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 LRRN4Q8WUT4 740 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 SNX19Q92543 992 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 UROC1Q96N76 676 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 PNKPQ96T60 521 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 CHMP4BQ9H444 224 aaKnown RBP7.63□□□□□ -1.19
UBE2F-204ENST00000409953 HELLSQ9NRZ9 838 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 CUEDC1Q9NWM3 386 aaPredicted RBP7.63□□□□□ -1.19
UBE2F-204ENST00000409953 DONSONQ9NYP3 566 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 ITGB1BP2Q9UKP3 347 aa7.63□□□□□ -1.19
UBE2F-204ENST00000409953 ZNF638Q14966 1978 aaKnown RBP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 UBE4BO95155 1302 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 A0A1B0GTQ1 180 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 MYMKA6NI61 221 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 METTL12A8MUP2 240 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 RTN2O75298 545 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 ITGAVP06756 1048 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 ABCB4P21439 1286 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 GNLYP22749 145 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 DDX6P26196 483 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 GRIA4P48058 902 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 ASIC1P78348 528 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 MBTD1Q05BQ5 628 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 MYBPC2Q14324 1141 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 C3orf38Q5JPI3 329 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 TXNDC8Q6A555 127 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 CAPRIN2Q6IMN6 1127 aaKnown RBP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 SND1Q7KZF4 910 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 ZNF589Q86UQ0 364 aaPredicted RBP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 PI4K2BQ8TCG2 481 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 ADNPQ9H2P0 1102 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 LINC00597Q9H2U6 94 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 ARHGEF4Q9NR80 690 aa7.62□□□□□ -1.19
UBE2F-204ENST00000409953 WSB2Q9NYS7 404 aaPredicted RBP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 MYO18AQ92614 2054 aaKnown RBP7.62□□□□□ -1.19
UBE2F-204ENST00000409953 SDK2Q58EX2 2172 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 A0A0D9SFI3 127 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 N4BP3O15049 544 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 DFNA5O60443 496 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 CSO75390 466 aaKnown RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 DDAH2O95865 285 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 FOSP01100 380 aaPredicted RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 KRT7P08729 469 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 CKMT2P17540 419 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 GRIA2P42262 883 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 CTSKP43235 329 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 TNFRSF4P43489 277 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 JAK3P52333 1124 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 PTENP60484 403 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 FAM160A1Q05DH4 1040 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 SRSF6Q13247 344 aaKnown RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 VEPH1Q14D04 833 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 TAF12Q16514 161 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 KCNT1Q5JUK3 1230 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 PPP1R26Q5T8A7 1209 aaPredicted RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 CCDC181Q5TID7 509 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 CENPPQ6IPU0 288 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 PPP1R18Q6NYC8 613 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 ZNF662Q6ZS27 426 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 KANSL1Q7Z3B3 1105 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 TMEM150AQ86TG1 271 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 FERMT3Q86UX7 667 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 C12orf40Q86WS4 652 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 SMC5Q8IY18 1101 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 ATAD1Q8NBU5 361 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 UBXN4Q92575 508 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 MRGPRX1Q96LB2 322 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 FAM227BQ96M60 508 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 SLC46A1Q96NT5 459 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 PPP1R10Q96QC0 940 aaKnown RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 DEPDC7Q96QD5 511 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 MTA3Q9BTC8 594 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 FUCA2Q9BTY2 467 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 KRT23Q9C075 422 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 SENP2Q9HC62 589 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 CD248Q9HCU0 757 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 TM9SF3Q9HD45 589 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 MAGEC2Q9UBF1 373 aaPredicted RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 SATB2Q9UPW6 733 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 NUB1Q9Y5A7 615 aa7.61□□□□□ -1.19
UBE2F-204ENST00000409953 FN1P02751 2386 aaKnown RBP7.61□□□□□ -1.19
UBE2F-204ENST00000409953 A0A1B0GUA9 196 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 hCG_1642624A0A1W2PR95 340 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 MTMR11A4FU01 709 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 RNF223E7ERA6 249 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 PODXLO00592 558 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 VPS4BO75351 444 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 CYP17A1P05093 508 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 PRKCGP05129 697 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 NTSR1P30989 418 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 SFNP31947 248 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 EIF2DP41214 584 aaKnown RBP7.6□□□□□ -1.19
UBE2F-204ENST00000409953 DUSP3P51452 185 aaPredicted RBP7.6□□□□□ -1.19
UBE2F-204ENST00000409953 NPEPPSP55786 919 aa7.6□□□□□ -1.19
UBE2F-204ENST00000409953 E2F1Q01094 437 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms