RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 APOC2P02655 101 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 C6orf222P0C671 652 aaPredicted RBP21.07■□□□□ 0.96
USP39-204ENST00000409766 LMO2P25791 158 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 GNL1P36915 607 aaPredicted RBP21.07■□□□□ 0.96
USP39-204ENST00000409766 RNASEH2BQ5TBB1 312 aaKnown RBP21.07■□□□□ 0.96
USP39-204ENST00000409766 TAF2Q6P1X5 1199 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 FAM228AQ86W67 206 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 RFX6Q8HWS3 928 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.07■□□□□ 0.96
USP39-204ENST00000409766 TRAPPC3O43617 180 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 PDGFRBP09619 1106 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 TAF6P49848 677 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 SNX16P57768 344 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 CDO1Q16878 200 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 ZNF618Q5T7W0 954 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 NLRP14Q86W24 1093 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 ZDHHC17Q8IUH5 632 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 ANKRD52Q8NB46 1076 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 MYCBPAPQ8TBZ2 947 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 MDM1Q8TC05 714 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 CCT8L2Q96SF2 557 aa21.07■□□□□ 0.96
USP39-204ENST00000409766 PPANQ9NQ55 473 aaKnown RBP21.07■□□□□ 0.96
USP39-204ENST00000409766 DCAF8L1A6NGE4 600 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 E7EVH7 732 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 PRPSAP2O60256 369 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 KPNA6O60684 536 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 IFNB1P01574 187 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 PECAM1P16284 738 aaPredicted RBP21.06■□□□□ 0.96
USP39-204ENST00000409766 MAGEA4P43358 317 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 CDR1P51861 262 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 GDF10P55107 478 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 CDH6P55285 790 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 APPL2Q8NEU8 664 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 CENPTQ96BT3 561 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 C9orf72Q96LT7 481 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 B3GNT5Q9BYG0 378 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 C10orf88Q9H8K7 445 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 SCN10AQ9Y5Y9 1956 aa21.06■□□□□ 0.96
USP39-204ENST00000409766 FAM155AB1AL88 458 aaPredicted RBP21.05■□□□□ 0.96
USP39-204ENST00000409766 FAM107AO95990 144 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 CCDC130P13994 396 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 RPL34P49207 117 aaKnown RBP21.05■□□□□ 0.96
USP39-204ENST00000409766 ATP11AP98196 1134 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 BST2Q10589 180 aaKnown RBP21.05■□□□□ 0.96
USP39-204ENST00000409766 MMRN1Q13201 1228 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 DPYSL3Q14195 570 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 CCDC142Q17RM4 750 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 SV2CQ496J9 727 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 TWF2Q6IBS0 349 aaKnown RBP21.05■□□□□ 0.96
USP39-204ENST00000409766 SHOC2Q9UQ13 582 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 GMNCA6NCL1 334 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 EBAG9O00559 213 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 NDC80O14777 642 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 SDC4P31431 198 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 BCAT1P54687 386 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 GJA9P57773 515 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 LILRA4P59901 499 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 GNASQ5JWF2 1037 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 ZNF473Q8WTR7 871 aaKnown RBP21.05■□□□□ 0.96
USP39-204ENST00000409766 FAM172AQ8WUF8 416 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 SNX25Q9H3E2 840 aa21.05■□□□□ 0.96
USP39-204ENST00000409766 FARP1Q9Y4F1 1045 aaPredicted RBP21.05■□□□□ 0.96
USP39-204ENST00000409766 PTGESO14684 152 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 ADORA2BP29275 332 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 MRPS6P82932 125 aaKnown RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 BOLA3Q53S33 107 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 SRLQ86TD4 932 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 EXOC3L1Q86VI1 746 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 MTG1Q9BT17 334 aaPredicted RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 SAYSD1Q9NPB0 183 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 GTF2IRD1Q9UHL9 959 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 ABHD2P08910 425 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 CYBAP13498 195 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 CHN1P15882 459 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 LRPAP1P30533 357 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 EIF3EP60228 445 aaKnown RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 ERMARDQ5T6L9 678 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 PCGF5Q86SE9 256 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 TEKT4Q8WW24 435 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 RSAD2Q8WXG1 361 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 PRCCQ92733 491 aaPredicted RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 PPP1R10Q96QC0 940 aaKnown RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 SELENOSQ9BQE4 189 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 MAK16Q9BXY0 300 aaKnown RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 NGRNQ9NPE2 291 aaKnown RBP21.04■□□□□ 0.96
USP39-204ENST00000409766 CYLDQ9NQC7 956 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 CDY2AQ9Y6F7 541 aa21.04■□□□□ 0.96
USP39-204ENST00000409766 HUS1O60921 280 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 IL4RP24394 825 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 PDK2Q15119 407 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 TAOK1Q7L7X3 1001 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 UNC45BQ8IWX7 931 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 ADGRF2Q8IZF7 708 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 SPATA18Q8TC71 538 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 RNF157Q96PX1 679 aa21.03■□□□□ 0.96
USP39-204ENST00000409766 RRP15Q9Y3B9 282 aaKnown RBP21.03■□□□□ 0.96
USP39-204ENST00000409766 MCF2LO15068 1137 aa21.02■□□□□ 0.96
USP39-204ENST00000409766 RBP3P10745 1247 aa21.02■□□□□ 0.96
USP39-204ENST00000409766 RPL22P35268 128 aaKnown RBP21.02■□□□□ 0.96
USP39-204ENST00000409766 SCNN1AP37088 669 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms