RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FAM124BQ9H5Z6 455 aaPredicted RBP15.79■□□□□ 0.12
SMIM11A-203ENST00000399299 LMAN1LQ9HAT1 526 aa15.79■□□□□ 0.12
SMIM11A-203ENST00000399299 HPS4Q9NQG7 708 aa15.79■□□□□ 0.12
SMIM11A-203ENST00000399299 COMMD8Q9NX08 183 aa15.79■□□□□ 0.12
SMIM11A-203ENST00000399299 IL37Q9NZH6 218 aa15.79■□□□□ 0.12
SMIM11A-203ENST00000399299 HMGXB4Q9UGU5 601 aa15.79■□□□□ 0.12
SMIM11A-203ENST00000399299 FRYLO94915 3013 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 TNFRSF10BO14763 440 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 PSMA7O14818 248 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 OLFM2O95897 454 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 YWHAQP27348 245 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 PMS1P54277 932 aaKnown RBP15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 SLC7A9P82251 487 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 TAF10Q12962 218 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 MTAPQ13126 283 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 DGKKQ5KSL6 1271 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 FOXR2Q6PJQ5 311 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 ASCL5Q7RTU5 278 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 TTC39CQ8N584 583 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 KIAA1958Q8N8K9 716 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 OSCP1Q8WVF1 389 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 DHTKD1Q96HY7 919 aaPredicted RBP15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 KCNK16Q96T55 309 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 NT5C1AQ9BXI3 368 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 DNAI2Q9GZS0 605 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 MMRN2Q9H8L6 949 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 CSNK1G1Q9HCP0 422 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 KRT82Q9NSB4 513 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 MAN1B1Q9UKM7 699 aa15.78■□□□□ 0.12
SMIM11A-203ENST00000399299 FAM92AA1XBS5 289 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 GADD45BO75293 160 aaPredicted RBP15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 CILPO75339 1184 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 AP1G2O75843 785 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 OAS1P00973 400 aaKnown RBP15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 CCDC130P13994 396 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 SLC5A3P53794 718 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 AMPD2Q01433 879 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 CCINQ13939 588 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 TRIM68Q6AZZ1 485 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 SYNPOQ8N3V7 929 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 TTC8Q8TAM2 541 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 SLC2A14Q8TDB8 520 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 SH3RF2Q8TEC5 729 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 NELL1Q92832 810 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 FAM126AQ9BYI3 521 aaPredicted RBP15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 EBF3Q9H4W6 596 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 RAB20Q9NX57 234 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 COQ4Q9Y3A0 265 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 R4GN57 208 aa15.77■□□□□ 0.12
SMIM11A-203ENST00000399299 CFAP54Q96N23 3096 aa15.77■□□□□ 0.11
SMIM11A-203ENST00000399299 MYO16Q9Y6X6 1858 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 PTPRZ1P23471 2315 aaPredicted RBP15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 TRIM49BA6NDI0 452 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 ARSAP15289 507 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 CCR3P51677 355 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 CSTF1Q05048 431 aaKnown RBP15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 ORC1Q13415 861 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 PPP2R5DQ14738 602 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 PON2Q15165 354 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 WDR44Q5JSH3 913 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 TCERG1LQ5VWI1 586 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 SNX30Q5VWJ9 437 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 SPEM1Q8N4L4 309 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 C12orf29Q8N999 325 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 ZBTB44Q8NCP5 570 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 ZMIZ2Q8NF64 920 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 WHAMMQ8TF30 809 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 SEMA4DQ92854 862 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 ATP2A3Q93084 1043 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 FBXO32Q969P5 355 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 CHFRQ96EP1 664 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 CEP63Q96MT8 703 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 TWNKQ96RR1 684 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 SMOQ99835 787 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 METTL14Q9HCE5 456 aaKnown RBP15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 PNPLA8Q9NP80 782 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 FAM49BQ9NUQ9 324 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 DUS2Q9NX74 493 aaKnown RBP15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 PCDHGA2Q9Y5H1 932 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 EP300Q09472 2414 aaPredicted RBP15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 OTOGLQ3ZCN5 2332 aa15.76■□□□□ 0.11
SMIM11A-203ENST00000399299 OTOL1A6NHN0 477 aaPredicted RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 TRDMT1O14717 391 aaKnown RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 PAPSS2O95340 614 aaPredicted RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 ZDHHC11BP0C7U3 371 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 FAM200BP0CF97 657 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 TDGF1P13385 188 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 CD44P16070 742 aaKnown RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 IFNAR2P48551 515 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 TUBP50607 506 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 ZXDBP98169 803 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 IFRD2Q12894 506 aaPredicted RBP15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 MORC3Q14149 939 aa15.75■□□□□ 0.11
SMIM11A-203ENST00000399299 GAS6Q14393 721 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms