RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ACO1P21399 889 aaKnown RBP14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 PGFP49763 221 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MLF2Q15773 248 aaPredicted RBP14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 TMEM270Q6UE05 265 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 C11orf57Q6ZUT1 292 aaPredicted RBP14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 TTC8Q8TAM2 541 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 DUSP16Q9BY84 665 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 FOXQ1Q9C009 403 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 RNF38Q9H0F5 515 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 FAM124BQ9H5Z6 455 aaPredicted RBP14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 OBP2AQ9NY56 170 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 IL37Q9NZH6 218 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 HCN4Q9Y3Q4 1203 aa14.91□□□□□ -0.02
HLA-DQB1-202ENST00000399079 ZNF638Q14966 1978 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 NUP210Q8TEM1 1887 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SHISA7A6NL88 538 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SOBPA7XYQ1 873 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CHADO15335 359 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CALCAP01258 141 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SLC9A1P19634 815 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 AOC1P19801 751 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 RFX1P22670 979 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 CLCN5P51795 746 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 STARD6P59095 220 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 YWHAEP62258 255 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 ZXDBP98169 803 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 TNK2Q07912 1038 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 SASS6Q6UVJ0 657 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 TPRG1Q6ZUI0 275 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 DNASE1L2Q92874 299 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 KREMEN1Q96MU8 473 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 DNAI2Q9GZS0 605 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 GMIPQ9P107 970 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MTF2Q9Y483 593 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 PCDHB4Q9Y5E5 795 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 ANAPC1Q9H1A4 1944 aa14.9□□□□□ -0.02
HLA-DQB1-202ENST00000399079 MYH10P35580 1976 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FAM92AA1XBS5 289 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 OAS1P00973 400 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 USP17L7P0C7H9 530 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CD19P15391 556 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PPP3CCP48454 512 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 GCNT1Q02742 428 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SGO2Q562F6 1265 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CT47A1Q5JQC4 288 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ARHGAP17Q68EM7 881 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TRIM68Q6AZZ1 485 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 GJB7Q6PEY0 223 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TRIM65Q6PJ69 517 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FAM114A1Q8IWE2 563 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SHDQ96IW2 340 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TUBGCP2Q9BSJ2 902 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TRPV5Q9NQA5 729 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TSPAN16Q9UKR8 245 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NFE2L3Q9Y4A8 694 aa14.89□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KCNJ18B7U540 433 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 DCNP07585 359 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SOX9P48436 509 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PRKCQQ04759 706 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KCNJ12Q14500 433 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZNF268Q14587 947 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MAN2A1Q16706 1144 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 GOLGA7BQ2TAP0 167 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ARHGAP29Q52LW3 1261 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MIIPQ5JXC2 388 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CAVIN1Q6NZI2 390 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ANKRD52Q8NB46 1076 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ENOX1Q8TC92 643 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TFAP2BQ92481 460 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZSWIM1Q9BR11 485 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 DDX23Q9BUQ8 820 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NDST4Q9H3R1 872 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 FBXO44Q9H4M3 255 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CCSER2Q9H7U1 834 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KIF9Q9HAQ2 790 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 GKN1Q9NS71 199 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SMPD4Q9NXE4 827 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SIT1Q9Y3P8 196 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PIAS3Q9Y6X2 628 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 F5P12259 2224 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MUC6Q6W4X9 2439 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MYO15AQ9UKN7 3530 aa14.88□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TICRRQ7Z2Z1 1910 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 TULP2O00295 520 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CYP26A1O43174 497 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZDHHC11BP0C7U3 371 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 GLULP15104 373 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 PON1P27169 355 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 KIF11P52732 1056 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 UBXN2BQ14CS0 331 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZNF77Q15935 545 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 STX1AQ16623 288 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
HLA-DQB1-202ENST00000399079 VWA3BQ502W6 1294 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms