RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PSMC3IPQ9P2W1 217 aaPredicted RBP11.98□□□□□ -0.49
PCDHGA8-201ENST00000398604 SPASTQ9UBP0 616 aa11.98□□□□□ -0.49
PCDHGA8-201ENST00000398604 TRIM17Q9Y577 477 aa11.98□□□□□ -0.49
PCDHGA8-201ENST00000398604 STRCQ7RTU9 1775 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 ARHGAP10A1A4S6 786 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 NCF1BA6NI72 391 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 NCF1CA8MVU1 366 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 TISP43B9A030 160 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 FKBP9O95302 570 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 MT-CO1P00395 513 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 LMNAP02545 664 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 NCF1P14598 390 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 AVPR1AP37288 418 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 COILP38432 576 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 CDKAL1Q5VV42 579 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 FKBP9P1Q75LS8 142 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 TFAP2DQ7Z6R9 452 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 COPS5Q92905 334 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 NMRK2Q9NPI5 230 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 ENTPD7Q9NQZ7 604 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 STX18Q9P2W9 335 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 TCRBV5S4A2TA0A5A2 114 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 LRRIQ3A6PVS8 624 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 AGRPO00253 132 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 EML1O00423 815 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 P4HA2O15460 535 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 DNAJC8O75937 253 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 MDH1P40925 334 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 PPATQ06203 517 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 PGM5Q15124 567 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 LVRNQ6Q4G3 990 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 KIF2BQ8N4N8 673 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 DAGLBQ8NCG7 672 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 INTS13Q9NVM9 706 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 CBX4O00257 560 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 SUPT7LO94864 414 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 ALDH2P05091 517 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 DSG3P32926 999 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 SARSP49591 514 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 PWP1Q13610 501 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 NFIL3Q16649 462 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 SNX31Q8N9S9 440 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 CINPQ9BW66 212 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 ANKZF1Q9H8Y5 726 aa11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 AGO4Q9HCK5 861 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 A1CFQ9NQ94 594 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 DMGDHQ9UI17 866 aaKnown RBP11.97□□□□□ -0.49
PCDHGA8-201ENST00000398604 CYTH3O43739 400 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 PYGLP06737 847 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 PYGBP11216 843 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 MYL4P12829 197 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 MZF1P28698 734 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 RGS4P49798 205 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 OTUD4Q01804 1114 aaKnown RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 MAPRE1Q15691 268 aaKnown RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 CENPPQ6IPU0 288 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 NAPEPLDQ6IQ20 393 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 CXCL17Q6UXB2 119 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 LRRC6Q86X45 466 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 CARNMT1Q8N4J0 409 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 NDE1Q9NXR1 346 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 SCHIP1Q9P0W5 487 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 VPS28Q9UK41 221 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 GAS2O43903 313 aaKnown RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 AGTP01019 485 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 URODP06132 367 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 RALBP11234 206 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 PTPN11Q06124 597 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 TBX2Q13207 712 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 CLEC16AQ2KHT3 1053 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 SDE2Q6IQ49 451 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 C11orf74Q86VG3 221 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 SLC44A2Q8IWA5 706 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 RAB42Q8N4Z0 105 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 PCSK9Q8NBP7 692 aaKnown RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 TFB1MQ8WVM0 346 aaKnown RBP11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 IDI2Q9BXS1 227 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 CYP4F12Q9HCS2 524 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 THEGQ9P2T0 379 aa11.96□□□□□ -0.49
PCDHGA8-201ENST00000398604 ATP5HO75947 161 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 VIL1P09327 827 aaKnown RBP11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 MCF2P10911 925 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 MYL2P10916 166 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 VDRP11473 427 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 SCNN1BP51168 640 aa11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 ZNF571Q7Z3V5 609 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA8-201ENST00000398604 FBXO25Q8TCJ0 367 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms