RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 COMMD8Q9NX08 183 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 MTF2Q9Y483 593 aaPredicted RBP17.7■□□□□ 0.42
APTR-201ENST00000398043 KIAA1549LQ6ZVL6 1849 aa17.7■□□□□ 0.42
APTR-201ENST00000398043 TRAV19A0A0A6YYK7 116 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 DPYSL4O14531 572 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 GALR2O43603 387 aaPredicted RBP17.69■□□□□ 0.42
APTR-201ENST00000398043 FGFR1OPO95684 399 aaKnown RBP17.69■□□□□ 0.42
APTR-201ENST00000398043 OAS1P00973 400 aaKnown RBP17.69■□□□□ 0.42
APTR-201ENST00000398043 ZDHHC11BP0C7U3 371 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 CD72P21854 359 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 YWHAQP27348 245 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 ADORA2BP29275 332 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 MAP3K7CLP57077 242 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 ZNF77Q15935 545 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 ZNF394Q53GI3 561 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 GPRIN1Q7Z2K8 1008 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 CCDC105Q8IYK2 499 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 OVCA2Q8WZ82 227 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 TMEM176AQ96HP8 235 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 ZFYVE19Q96K21 471 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 PRRX2Q99811 253 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 OSBPL6Q9BZF3 934 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 LTB4R2Q9NPC1 389 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 TRPM5Q9NZQ8 1165 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 SIT1Q9Y3P8 196 aa17.69■□□□□ 0.42
APTR-201ENST00000398043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.69■□□□□ 0.42
APTR-201ENST00000398043 USP17L7P0C7H9 530 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 FAM200BP0CF97 657 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 CCDC192P0DO97 292 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 HDCP19113 662 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 ACO1P21399 889 aaKnown RBP17.68■□□□□ 0.42
APTR-201ENST00000398043 ERCC5P28715 1186 aaPredicted RBP17.68■□□□□ 0.42
APTR-201ENST00000398043 LRMPQ12912 555 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 USP4Q13107 963 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 ARHGAP17Q68EM7 881 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 YAF2Q8IY57 180 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 CNOT6LQ96LI5 555 aaKnown RBP17.68■□□□□ 0.42
APTR-201ENST00000398043 SLITRK1Q96PX8 696 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 TRPC7Q9HCX4 862 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
APTR-201ENST00000398043 AFPP02771 609 aaKnown RBP17.67■□□□□ 0.42
APTR-201ENST00000398043 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
APTR-201ENST00000398043 TARSP26639 723 aaKnown RBP17.67■□□□□ 0.42
APTR-201ENST00000398043 PGFP49763 221 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 SLC7A9P82251 487 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 PLCB2Q00722 1185 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 DTWD2Q8NBA8 298 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 EHBP1Q8NDI1 1231 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 KAT5Q92993 513 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 FBXO32Q969P5 355 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 CLDN23Q96B33 292 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 CHFRQ96EP1 664 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 HEXIM2Q96MH2 286 aaKnown RBP17.67■□□□□ 0.42
APTR-201ENST00000398043 NT5C1BQ96P26 610 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 DUSP16Q9BY84 665 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 HPS4Q9NQG7 708 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 GKN1Q9NS71 199 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 GTSE1Q9NYZ3 720 aa17.67■□□□□ 0.42
APTR-201ENST00000398043 MYO18AQ92614 2054 aaKnown RBP17.67■□□□□ 0.42
APTR-201ENST00000398043 OTOL1A6NHN0 477 aaPredicted RBP17.66■□□□□ 0.42
APTR-201ENST00000398043 STK25O00506 426 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 DCNP07585 359 aaKnown RBP17.66■□□□□ 0.42
APTR-201ENST00000398043 TRIM21P19474 475 aaKnown RBP17.66■□□□□ 0.42
APTR-201ENST00000398043 TNK2Q07912 1038 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 IFRD2Q12894 506 aaPredicted RBP17.66■□□□□ 0.42
APTR-201ENST00000398043 ZNF852Q6ZMS4 543 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 ARHGEF19Q8IW93 802 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 NELL2Q99435 816 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 THAP9Q9H5L6 903 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 GMIPQ9P107 970 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 CHORDC1Q9UHD1 332 aaPredicted RBP17.66■□□□□ 0.42
APTR-201ENST00000398043 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
APTR-201ENST00000398043 FAM170BA6NMN3 283 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 RNF225M0QZC1 329 aaPredicted RBP17.65■□□□□ 0.42
APTR-201ENST00000398043 MAN2B1O00754 1011 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 CKMP06732 381 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 PLA2G5P39877 138 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 TUBP50607 506 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 PDE6CP51160 858 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 NHLH1Q02575 133 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 GCNT1Q02742 428 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 CT47A1Q5JQC4 288 aaPredicted RBP17.65■□□□□ 0.42
APTR-201ENST00000398043 TTC30AQ86WT1 665 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 SH3RF2Q8TEC5 729 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 ZFRQ96KR1 1074 aaKnown RBP17.65■□□□□ 0.42
APTR-201ENST00000398043 KREMEN1Q96MU8 473 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 UBXN6Q9BZV1 441 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 DNAI2Q9GZS0 605 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 INTS2Q9H0H0 1204 aaKnown RBP17.65■□□□□ 0.42
APTR-201ENST00000398043 FBXO44Q9H4M3 255 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 THG1LQ9NWX6 298 aaKnown RBP17.65■□□□□ 0.42
APTR-201ENST00000398043 CNTN6Q9UQ52 1028 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 SCML2Q9UQR0 700 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 USP3Q9Y6I4 520 aa17.65■□□□□ 0.42
APTR-201ENST00000398043 SPECC1L-ADORA2AF8WAN1 911 aa17.64■□□□□ 0.41
APTR-201ENST00000398043 COCHO43405 550 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms