RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CNOT10Q9H9A5 744 aaKnown RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 ROPN1Q9HAT0 212 aaPredicted RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.67■□□□□ 0.1
CBX3-202ENST00000396386 DNAJC17Q9NVM6 304 aaKnown RBP15.67■□□□□ 0.1
CBX3-202ENST00000396386 SRRM3A6NNA2 597 aaPredicted RBP15.66■□□□□ 0.1
CBX3-202ENST00000396386 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 HCRTO43612 131 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 LRPAP1P30533 357 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 SDC4P31431 198 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 CDH6P55285 790 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 TAF5Q15542 800 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 CDO1Q16878 200 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 NBPF20Q3BBV1 942 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 CXCL17Q6UXB2 119 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 CYP4V2Q6ZWL3 525 aaPredicted RBP15.66■□□□□ 0.1
CBX3-202ENST00000396386 LIMS2Q7Z4I7 341 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 RELL1Q8IUW5 271 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 HACE1Q8IYU2 909 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 ANKRD52Q8NB46 1076 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 NCAPGQ9BPX3 1015 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 CYLDQ9NQC7 956 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 NINJ2Q9NZG7 142 aa15.66■□□□□ 0.1
CBX3-202ENST00000396386 APOC4-APOC2K7ER74 178 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PTGESO14684 152 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PAPSS1O43252 624 aaPredicted RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 APOC2P02655 101 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PDGFRBP09619 1106 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 ZSCAN5DPP0CG00 497 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 WARSP23381 471 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 SCNN1AP37088 669 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PSMC4P43686 418 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 TM4SF4P48230 202 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 MORF4L2Q15014 288 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PTGISQ16647 500 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 CCDC14Q49A88 953 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 SH3PXD2AQ5TCZ1 1133 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 GDF6Q6KF10 455 aaPredicted RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 TOP6BLQ8N6T0 577 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 BCAS4Q8TDM0 211 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 TEKT4Q8WW24 435 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 TNIP3Q96KP6 325 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 CFAP57Q96MR6 1250 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PPP1R10Q96QC0 940 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 LPIN3Q9BQK8 851 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 ARHGAP39Q9C0H5 1083 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 ADAM7Q9H2U9 754 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 NGRNQ9NPE2 291 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 TPX2Q9ULW0 747 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 ABT1Q9ULW3 272 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 SHOC2Q9UQ13 582 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 MCF2LO15068 1137 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 CAPN15O75808 1086 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 ENDOD1O94919 500 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 PGK1P00558 417 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 RPLP2P05387 115 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 RARBP10826 455 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 ETS1P14921 441 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 RDXP35241 583 aaKnown RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 TFDP2Q14188 446 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 KRT81Q14533 505 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 FAM47CQ5HY64 1035 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 FAM172AQ8WUF8 416 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 SENP6Q9GZR1 1112 aaPredicted RBP15.65■□□□□ 0.1
CBX3-202ENST00000396386 EPN3Q9H201 632 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 GABRQQ9UN88 632 aa15.65■□□□□ 0.1
CBX3-202ENST00000396386 SEPT4O43236 478 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 IFNB1P01574 187 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 CTSHP09668 335 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 LMO2P25791 158 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 ACADSBP45954 432 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 SLCO1A2P46721 670 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 LILRA4P59901 499 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 EIF3EP60228 445 aaKnown RBP15.64■□□□□ 0.09
CBX3-202ENST00000396386 ATP11AP98196 1134 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 DPYSL3Q14195 570 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 PDK2Q15119 407 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 ZNF618Q5T7W0 954 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 RNASEH2BQ5TBB1 312 aaKnown RBP15.64■□□□□ 0.09
CBX3-202ENST00000396386 FOXR1Q6PIV2 292 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 SLC26A9Q7LBE3 791 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 SCUBE3Q8IX30 993 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 RSAD2Q8WXG1 361 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 PWWP2AQ96N64 755 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.092e-7■□□□□ 8.2
CBX3-202ENST00000396386 TBCBQ99426 244 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 MAK16Q9BXY0 300 aaKnown RBP15.64■□□□□ 0.09
CBX3-202ENST00000396386 FAM105AQ9NUU6 356 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 SLC38A7Q9NVC3 462 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 SAE1Q9UBE0 346 aaPredicted RBP15.64■□□□□ 0.09
CBX3-202ENST00000396386 THSD7BQ9C0I4 1608 aa15.64■□□□□ 0.09
CBX3-202ENST00000396386 TSC2P49815 1807 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 GABBR2O75899 941 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 ABHD2P08910 425 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 PECAM1P16284 738 aaPredicted RBP15.63■□□□□ 0.09
CBX3-202ENST00000396386 PTPN9P43378 593 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 RPL34P49207 117 aaKnown RBP15.63■□□□□ 0.09
CBX3-202ENST00000396386 FLT3LGP49771 235 aa15.63■□□□□ 0.09
CBX3-202ENST00000396386 NKX3-2P78367 333 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms