RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 LY6KQ17RY6 165 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 RABGAP1LQ5R372 815 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 ITIH5Q86UX2 942 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 JAMLQ86YT9 394 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 ZBED2Q9BTP6 218 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 KIFC3Q9BVG8 833 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 DPH5Q9H2P9 285 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 DHX35Q9H5Z1 703 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 DNAJC13O75165 2243 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 MT-ND3P03897 115 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PPP2R2AP63151 447 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 RNF187Q5TA31 235 aaPredicted RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 LCLAT1Q6UWP7 414 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 SCARA5Q6ZMJ2 495 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PALB2Q86YC2 1186 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 TACO1Q9BSH4 297 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 TRIM55Q9BYV6 548 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CELF4Q9BZC1 486 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 KRT14P02533 472 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CYBBP04839 570 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CPB1P15086 417 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 MATKP42679 507 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PPP3CCP48454 512 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CLDN10P78369 228 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 UAP1Q16222 522 aaPredicted RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 NIPA2Q8N8Q9 360 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PHC3Q8NDX5 983 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 OSMRQ99650 979 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 GMNCA6NCL1 334 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 TM9SF1O15321 606 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CCNE2O96020 404 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 TSPAN17Q96FV3 270 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 ZFP91Q96JP5 570 aaPredicted RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PITPNM3Q9BZ71 974 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PSMC3IPQ9P2W1 217 aaPredicted RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 RWDD3Q9Y3V2 267 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC22O60826 627 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 COBLO75128 1261 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 ITGAVP06756 1048 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 EIF3EP60228 445 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PDCLQ13371 301 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 RRP1BQ14684 758 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 CDO1Q16878 200 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 ACTL9Q8TC94 416 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 C2orf15Q8WU43 125 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 PURBQ96QR8 312 aaKnown RBP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC1Q9BTT6 524 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 RAB6BQ9NRW1 208 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS13C-203ENST00000395896 SETD4Q9NVD3 440 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 NCANO14594 1321 aa3.53□□□□□ -1.84
VPS13C-203ENST00000395896 ACSL3O95573 720 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 MYL4P12829 197 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 SLC11A2P49281 568 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 THOC5Q13769 683 aaKnown RBP3.53□□□□□ -1.85
VPS13C-203ENST00000395896 CCDC38Q502W7 563 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 EPC2Q52LR7 807 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 TREML2Q5T2D2 321 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 OVOS1Q6IE37 1185 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 RAB44Q7Z6P3 723 aaPredicted RBP3.53□□□□□ -1.85
VPS13C-203ENST00000395896 CRLF3Q8IUI8 442 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 PASD1Q8IV76 773 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 HELQQ8TDG4 1101 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 AP1M1Q9BXS5 423 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 TRIM54Q9BYV2 358 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 UBXN6Q9BZV1 441 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 RBM12Q9NTZ6 932 aaKnown RBP3.53□□□□□ -1.85
VPS13C-203ENST00000395896 COL20A1Q9P218 1284 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 FETUBQ9UGM5 382 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF541Q9H0D2 1346 aa3.53□□□□□ -1.85
VPS13C-203ENST00000395896 FAM47DPA6NHR8 397 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TRDMT1O14717 391 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CHEK2O96017 543 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 MMEP08473 750 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CXCL8P10145 99 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GRIK1P39086 918 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 DAW1Q8N136 415 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RABEP2Q9H5N1 569 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GRID1Q9ULK0 1009 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RIPK3Q9Y572 518 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 DNAJC25-GNG10A0A024R161 153 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 BTBD19C9JJ37 291 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 FAM107AO95990 144 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 BRAFP15056 766 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 EPHB2P29323 1055 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 C2orf54Q08AI8 447 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 BRMS1LQ5PSV4 323 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RNF219Q5W0B1 726 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SCN4BQ8IWT1 228 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SLC30A5Q8TAD4 765 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 MICAL1Q8TDZ2 1067 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PXYLP1Q8TE99 480 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 FAF2Q96CS3 445 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 DCLK3Q9C098 648 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ABCC13Q9NSE7 274 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 DOCK5Q9H7D0 1870 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF487B1APH4 448 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PIK3R2O00459 728 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ADCYAP1R1P41586 468 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TUSC3Q13454 348 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms