RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 RSPRY1Q96DX4 576 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 FAM81BQ96LP2 452 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 FHOD1Q9Y613 1164 aa17.5■□□□□ 0.39
CXCL1-201ENST00000395761 MYO10Q9HD67 2058 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 GREB1Q4ZG55 1949 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 PI4K2BG5E9Z4 385 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 TULP2O00295 520 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 NARSO43776 548 aaKnown RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 RTN3O95197 1032 aaPredicted RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 TDGQ13569 410 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 SYCP1Q15431 976 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 CNGA2Q16280 664 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 MTSS1LQ765P7 747 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 MON1AQ86VX9 555 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 ARID3BQ8IVW6 561 aaPredicted RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 NXPE3Q969Y0 559 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 SLC22A12Q96S37 553 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 CYP2S1Q96SQ9 504 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 NAA15Q9BXJ9 866 aaKnown RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 GANQ9H2C0 597 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 PLCB1Q9NQ66 1216 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 EHD2Q9NZN4 543 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
CXCL1-201ENST00000395761 SIK3Q9Y2K2 1263 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 MUC3AQ02505 3323 aa17.49■□□□□ 0.39
CXCL1-201ENST00000395761 C2orf78A6NCI8 922 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 ZNF840PA6NDX5 716 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 EPHB6O15197 1021 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 CYP26A1O43174 497 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 TEX33O43247 280 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 ECI2O75521 394 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 UCHL3P15374 230 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 PGFP49763 221 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 ZXDAP98168 799 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 PDE4CQ08493 712 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 RAPGEF1Q13905 1077 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 DRAP1Q14919 205 aaPredicted RBP17.48■□□□□ 0.39
CXCL1-201ENST00000395761 PKDCCQ504Y2 493 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 PIGZQ86VD9 579 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 CMTM8Q8IZV2 173 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 FBXO32Q969P5 355 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 NAP1L5Q96NT1 182 aaPredicted RBP17.48■□□□□ 0.39
CXCL1-201ENST00000395761 LRRC3BQ96PB8 259 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 TRPV4Q9HBA0 871 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 ZFP14Q9HCL3 533 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 TRPC7Q9HCX4 862 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 FAM207AQ9NSI2 230 aaPredicted RBP17.48■□□□□ 0.39
CXCL1-201ENST00000395761 COMMD8Q9NX08 183 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 TRPM5Q9NZQ8 1165 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 HESX1Q9UBX0 185 aa17.48■□□□□ 0.39
CXCL1-201ENST00000395761 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.48■□□□□ 0.39
CXCL1-201ENST00000395761 NCANO14594 1321 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 FAM92AA1XBS5 289 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 PRAMEF12O95522 483 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 ABL1P00519 1130 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 CFHP08603 1231 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 ALADP13716 330 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 DDX6P26196 483 aaKnown RBP eCLIP17.47■□□□□ 0.39
CXCL1-201ENST00000395761 CLCN1P35523 988 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 KIF11P52732 1056 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 BCAT1P54687 386 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 EDAQ92838 391 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 ELSPBP1Q96BH3 223 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 SLITRK1Q96PX8 696 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 UBXN6Q9BZV1 441 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 PNPLA8Q9NP80 782 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
CXCL1-201ENST00000395761 GMIPQ9P107 970 aa17.47■□□□□ 0.39
CXCL1-201ENST00000395761 GOLGA6L3A6NEY3 463 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 M0QYV0 167 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 GABBR2O75899 941 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 WEE1P30291 646 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 POLR2FP61218 127 aaKnown RBP17.46■□□□□ 0.39
CXCL1-201ENST00000395761 FANCCQ00597 558 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 BST2Q10589 180 aaKnown RBP17.46■□□□□ 0.39
CXCL1-201ENST00000395761 GRM2Q14416 872 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 GSE1Q14687 1217 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 VITQ6UXI7 678 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 FAM71AQ8IYT1 594 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 ARL14EPQ8N8R7 260 aaPredicted RBP17.46■□□□□ 0.39
CXCL1-201ENST00000395761 ZNF606Q8WXB4 792 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 USP13Q92995 863 aaPredicted RBP17.46■□□□□ 0.39
CXCL1-201ENST00000395761 SECISBP2LQ93073 1101 aaKnown RBP17.46■□□□□ 0.39
CXCL1-201ENST00000395761 PCMTD1Q96MG8 357 aaPredicted RBP17.46■□□□□ 0.39
CXCL1-201ENST00000395761 ERGIC2Q96RQ1 377 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 STK33Q9BYT3 514 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 FBXO44Q9H4M3 255 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 USP3Q9Y6I4 520 aa17.46■□□□□ 0.39
CXCL1-201ENST00000395761 A0A1B0GTH6 734 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 SOBPA7XYQ1 873 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 HEPACAM2A8MVW5 462 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 XPO1O14980 1071 aaKnown RBP17.45■□□□□ 0.38
CXCL1-201ENST00000395761 THAP12O43422 761 aa17.45■□□□□ 0.38
CXCL1-201ENST00000395761 ZDHHC11BP0C7U3 371 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms