RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 RIPK2O43353 540 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 IFNB1P01574 187 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 RARGP13631 454 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 LCP1P13796 627 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 TFE3P19532 575 aaPredicted RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 CD52P31358 61 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 SP3Q02447 781 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 MGAT3Q09327 533 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 BST2Q10589 180 aaKnown RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 SLMAPQ14BN4 828 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 OASLQ15646 514 aaKnown RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 PTGISQ16647 500 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 P3H1Q32P28 736 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 SPDYCQ5MJ68 293 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 WSCD1Q658N2 575 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 SCYL2Q6P3W7 929 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 RFX6Q8HWS3 928 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 ANKRD52Q8NB46 1076 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 SMC1BQ8NDV3 1235 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 DDX23Q9BUQ8 820 aaKnown RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 CAPS2Q9BXY5 557 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
CASP3-202ENST00000393585 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.51□□□□□ -0.57
CASP3-202ENST00000393585 GPATCH2LQ9NWQ4 482 aa11.51□□□□□ -0.57
CASP3-202ENST00000393585 TLDC2A0PJX2 215 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 CLDN5O00501 218 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 CYB561D2O14569 222 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 CAND2O75155 1236 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 ACSL3O95573 720 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 NUDT17P0C025 328 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 SETSIPP0DME0 302 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 LRPAP1P30533 357 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 SCNN1GP51170 649 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 ARSEP51690 589 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 CLCNKBP51801 687 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 BCAT1P54687 386 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 CDH6P55285 790 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 ACAP1Q15027 740 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 AGMOQ6ZNB7 445 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 ALLCQ8N6M5 410 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 CMASQ8NFW8 434 aaPredicted RBP11.5□□□□□ -0.57
CASP3-202ENST00000393585 FAM172AQ8WUF8 416 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 RABEP2Q9H5N1 569 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 NOVA2Q9UNW9 492 aaKnown RBP11.5□□□□□ -0.57
CASP3-202ENST00000393585 TIMM13Q9Y5L4 95 aaPredicted RBP11.5□□□□□ -0.57
CASP3-202ENST00000393585 SGK1O00141 431 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 PRPSAP2O60256 369 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 MGEA5O60502 916 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 SDC4P31431 198 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 PCK1P35558 622 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 ACTN2P35609 894 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 FAM182AQ5T1J6 154 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 DRICH1Q6PGQ1 229 aaPredicted RBP11.5□□□□□ -0.57
CASP3-202ENST00000393585 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 B3GALNT2Q8NCR0 500 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 KLHDC9Q8NEP7 349 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 HHIPL1Q96JK4 782 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 TRMT13Q9NUP7 481 aaKnown RBP11.5□□□□□ -0.57
CASP3-202ENST00000393585 PADI3Q9ULW8 664 aa11.5□□□□□ -0.57
CASP3-202ENST00000393585 ARL5CA6NH57 179 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 CASTOR2A6NHX0 329 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 THP07101 528 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 PECAM1P16284 738 aaPredicted RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 SLCO1A2P46721 670 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 ATXN1P54253 815 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 GDF10P55107 478 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 EIF3BP55884 814 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 GNGT1P63211 74 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 LMNB2Q03252 620 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 NOGQ13253 232 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 BBS12Q6ZW61 710 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 SLC35B2Q8TB61 432 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 NDRG1Q92597 394 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 TNIP3Q96KP6 325 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 FAM129AQ9BZQ8 928 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 SHOX2O60902 331 aaPredicted RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 BEST1O76090 585 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 WARSP23381 471 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 RABGGTBP53611 331 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 MAGOHP61326 146 aaKnown RBP11.49□□□□□ -0.57
CASP3-202ENST00000393585 SKOR1P84550 965 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 GUCY1A3Q02108 690 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 GPS1Q13098 491 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 TAZQ16635 292 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 KIAA0319Q5VV43 1072 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 NPNTQ6UXI9 565 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 KDM7AQ6ZMT4 941 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 LEKR1Q6ZMV7 388 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 FUKQ8N0W3 1084 aa11.49□□□□□ -0.57
CASP3-202ENST00000393585 TAB3Q8N5C8 712 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms