RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 H2AFYO75367 372 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 NPTXRO95502 500 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 ETFBP38117 255 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 GEMP55040 296 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 NFIAQ12857 509 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 MRNIPQ6NTE8 343 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 IZUMO2Q6UXV1 221 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 CREG2Q8IUH2 290 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 DCP1BQ8IZD4 617 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 RAB42Q8N4Z0 105 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 FAM172AQ8WUF8 416 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 JADE3Q92613 823 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 ZBTB10Q96DT7 871 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 WDCPQ9H6R7 721 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 GPATCH2LQ9NWQ4 482 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 CFAP99D6REC4 459 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 CPA3P15088 417 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 MRPL28Q13084 256 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 MEA1Q16626 185 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 CLEC16AQ2KHT3 1053 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 SLC44A4Q53GD3 710 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 GPR141Q7Z602 305 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
LCA5-202ENST00000392959 ANKRD27Q96NW4 1050 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 APOL5Q9BWW9 433 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 BRD8Q9H0E9 1235 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 MUC3BQ9H195 1237 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 VPS9D1Q9Y2B5 631 aa13.58□□□□□ -0.24
LCA5-202ENST00000392959 LRRC10BA6NIK2 292 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 ASMTLO95671 621 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 ACO1P21399 889 aaKnown RBP13.57□□□□□ -0.24
LCA5-202ENST00000392959 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 GTF2H3Q13889 308 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 Q4G0T1 1027 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 ACOT1Q86TX2 421 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 EMC1Q8N766 993 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 DDHD1Q8NEL9 900 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 APPL1Q9UKG1 709 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 BAZ2BQ9UIF8 2168 aaKnown RBP13.57□□□□□ -0.24
LCA5-202ENST00000392959 STX7O15400 261 aaKnown RBP13.57□□□□□ -0.24
LCA5-202ENST00000392959 ZNF23P17027 643 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 GLRBP48167 497 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 PSMC6P62333 389 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 SLC35C1Q96A29 364 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 PLEKHA8Q96JA3 519 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 CISHQ9NSE2 258 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 RUVBL2Q9Y230 463 aaKnown RBP13.57□□□□□ -0.24
LCA5-202ENST00000392959 AK9Q5TCS8 1911 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 SLCO1B7G3V0H7 640 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 CLPTM1O96005 669 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 GYS1P13807 737 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 RPL21P46778 160 aaKnown RBP13.57□□□□□ -0.24
LCA5-202ENST00000392959 CCDC81Q6ZN84 652 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 PGM2Q96G03 612 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 ACOT9Q9Y305 439 aa13.57□□□□□ -0.24
LCA5-202ENST00000392959 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 E9PBE3 544 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 MAP2K7O14733 419 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 KLHL41O60662 606 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 IFI35P80217 286 aaPredicted RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 BMPR2Q13873 1038 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 TRIM16LQ309B1 348 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 IYDQ6PHW0 289 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 GLB1LQ6UWU2 654 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 ABRAQ8N0Z2 381 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 SNX31Q8N9S9 440 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 AAR2Q9Y312 384 aaKnown RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.24
LCA5-202ENST00000392959 F9P00740 461 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 PGK2P07205 417 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 CHRNB3Q05901 458 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 ANGEL2Q5VTE6 544 aaKnown RBP13.56□□□□□ -0.24
LCA5-202ENST00000392959 TMPRSS6Q8IU80 811 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 PNMA5Q96PV4 448 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 DCLK3Q9C098 648 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 ZCWPW1Q9H0M4 648 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 C10orf88Q9H8K7 445 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
LCA5-202ENST00000392959 A0A087X0B3 334 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 EFCAB14O75071 495 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 PDE5AO76074 875 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 PYGMP11217 842 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 AVPR1AP37288 418 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 PEX5P50542 639 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 BLVRAP53004 296 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 LAMC2Q13753 1193 aa13.56□□□□□ -0.24
LCA5-202ENST00000392959 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms