RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 IVDP26440 423 aa26.42■■□□□ 1.82
SHOX2-201ENST00000389589 SDC4P31431 198 aa26.42■■□□□ 1.82
SHOX2-201ENST00000389589 CCDC14Q49A88 953 aa26.42■■□□□ 1.82
SHOX2-201ENST00000389589 WSCD1Q658N2 575 aa26.42■■□□□ 1.82
SHOX2-201ENST00000389589 BBS12Q6ZW61 710 aa26.42■■□□□ 1.82
SHOX2-201ENST00000389589 GSTA5Q7RTV2 222 aa26.42■■□□□ 1.82
SHOX2-201ENST00000389589 PRPSAP2O60256 369 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 GRAP2O75791 330 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 GABBR2O75899 941 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 ADCY8P40145 1251 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 LHX1P48742 406 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 SCNN1GP51170 649 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 EIF3BP55884 814 aaKnown RBP26.41■■□□□ 1.82
SHOX2-201ENST00000389589 TTMPQ5BVD1 217 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 CEP85LQ5SZL2 805 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 KHSRPQ92945 711 aaKnown RBP eCLIP26.41■■□□□ 1.82
SHOX2-201ENST00000389589 NKD2Q969F2 451 aaPredicted RBP26.41■■□□□ 1.82
SHOX2-201ENST00000389589 ARL8AQ96BM9 186 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 FAM118BQ9BPY3 351 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 PABPC3Q9H361 631 aaKnown RBP26.41■■□□□ 1.82
SHOX2-201ENST00000389589 RSAD1Q9HA92 442 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 DNPEPQ9ULA0 475 aa26.41■■□□□ 1.82
SHOX2-201ENST00000389589 FRMPD3Q5JV73 1810 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 XPO1O14980 1071 aaKnown RBP26.4■■□□□ 1.82
SHOX2-201ENST00000389589 MGEA5O60502 916 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 PTPN1P18031 435 aaKnown RBP26.4■■□□□ 1.82
SHOX2-201ENST00000389589 CLCNKBP51801 687 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 VCPP55072 806 aaKnown RBP26.4■■□□□ 1.82
SHOX2-201ENST00000389589 SLC26A9Q7LBE3 791 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 OSBPL7Q9BZF2 842 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 ZNF148Q9UQR1 794 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 MAP2K2P36507 400 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 C15orf59Q2T9L4 293 aaPredicted RBP26.4■■□□□ 1.82
SHOX2-201ENST00000389589 HSPH1Q92598 858 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 DUSP16Q9BY84 665 aa26.4■■□□□ 1.82
SHOX2-201ENST00000389589 ITGAVP06756 1048 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 RARGP13631 454 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 KLRC2P26717 231 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 AFF1P51825 1210 aaKnown RBP26.39■■□□□ 1.82
SHOX2-201ENST00000389589 BOLA3Q53S33 107 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 CFAP57Q96MR6 1250 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 PEBP4Q96S96 227 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 ADAM2Q99965 735 aa26.39■■□□□ 1.82
SHOX2-201ENST00000389589 MYZAPP0CAP1 466 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 PTPN9P43378 593 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 ARHGEF6Q15052 776 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 TAF5Q15542 800 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 TRIP13Q15645 432 aaPredicted RBP26.38■■□□□ 1.81
SHOX2-201ENST00000389589 RHBDF2Q6PJF5 856 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 DSTYKQ6XUX3 929 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 ALLCQ8N6M5 410 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 TEKT4Q8WW24 435 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 TBCBQ99426 244 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 B3GNT5Q9BYG0 378 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 CST8O60676 142 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 ENDOD1O94919 500 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 NUDT17P0C025 328 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 PAX3P23760 479 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 TKTP29401 623 aaKnown RBP26.38■■□□□ 1.81
SHOX2-201ENST00000389589 APLP1P51693 650 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 ZNF844Q08AG5 666 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 OASLQ15646 514 aaKnown RBP26.38■■□□□ 1.81
SHOX2-201ENST00000389589 CDO1Q16878 200 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 SH3PXD2AQ5TCZ1 1133 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 FUKQ8N0W3 1084 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 TMBIM4Q9HC24 238 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 DDX43Q9NXZ2 648 aaKnown RBP26.38■■□□□ 1.81
SHOX2-201ENST00000389589 ANAPC5Q9UJX4 755 aa26.38■■□□□ 1.81
SHOX2-201ENST00000389589 HMGB1P1B2RPK0 211 aaPredicted RBP26.37■■□□□ 1.81
SHOX2-201ENST00000389589 TP73O15350 636 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 LCP1P13796 627 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 ITGA8P53708 1063 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 UPP1Q16831 310 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 CYP4V2Q6ZWL3 525 aaPredicted RBP26.37■■□□□ 1.81
SHOX2-201ENST00000389589 MAP7D3Q8IWC1 876 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 SLAIN1Q8ND83 568 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 SLC35B2Q8TB61 432 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 FAM172AQ8WUF8 416 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 ATP6V1G3Q96LB4 118 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.37■■□□□ 1.81
SHOX2-201ENST00000389589 ATP11AP98196 1134 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 PLCB3Q01970 1234 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 GRIK3Q13003 919 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 PDK2Q15119 407 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 EFHC1Q5JVL4 640 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 DENND2CQ68D51 928 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 RFX6Q8HWS3 928 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 RNF169Q8NCN4 708 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 SPATA18Q8TC71 538 aa26.37■■□□□ 1.81
SHOX2-201ENST00000389589 HMX1Q9NP08 348 aaPredicted RBP26.37■■□□□ 1.81
SHOX2-201ENST00000389589 NGRNQ9NPE2 291 aaKnown RBP26.37■■□□□ 1.81
SHOX2-201ENST00000389589 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.37■■□□□ 1.81
SHOX2-201ENST00000389589 NDC80O14777 642 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 ATP2C2O75185 946 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 INHAP05111 366 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 CD48P09326 243 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 NPR3P17342 541 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 ACAT1P24752 427 aaKnown RBP26.36■■□□□ 1.81
SHOX2-201ENST00000389589 VSIG1Q86XK7 387 aa26.36■■□□□ 1.81
SHOX2-201ENST00000389589 CALN1Q9BXU9 219 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms