RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 RESTQ13127 1097 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 SLC36A4Q6YBV0 504 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 SFTPA1Q8IWL2 248 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 CSGALNACT2Q8N6G5 542 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 RAD54LQ92698 747 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 HVCN1Q96D96 273 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 CAPN10Q9HC96 672 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 ARHGEF4Q9NR80 690 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 ITGA11Q9UKX5 1188 aa22.85■■□□□ 1.25
CNEP1R1-201ENST00000389134 KNL1Q8NG31 2342 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 PTPRBP23467 1997 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 TCRBV21S2A2A0A5A6 115 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 TULP1O00294 542 aaPredicted RBP22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 ADAM23O75077 832 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 ADH1CP00326 375 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 FAM193AP78312 1265 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 CCDC142Q17RM4 750 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 EMC10Q5UCC4 262 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 DENND5BQ6ZUT9 1274 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 ZNF720Q7Z2F6 126 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 BRSK2Q8IWQ3 736 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 FAM213AQ9BRX8 229 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 GPSM3Q9Y4H4 160 aa22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 SETXQ7Z333 2677 aaKnown RBP22.84■■□□□ 1.25
CNEP1R1-201ENST00000389134 PLCG1P19174 1290 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 GRIK1P39086 918 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 RBP5P82980 135 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 RPL6Q02878 288 aaKnown RBP22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 MESP2Q0VG99 397 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 MAPRE1Q15691 268 aaKnown RBP22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 RHBDF2Q6PJF5 856 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 MINDY1Q8N5J2 469 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 CXorf38Q8TB03 319 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 KCNV2Q8TDN2 545 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 RNF38Q9H0F5 515 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 FSCN3Q9NQT6 498 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 CDH9Q9ULB4 789 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 KIF3AQ9Y496 699 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 CPQQ9Y646 472 aa22.83■■□□□ 1.25
CNEP1R1-201ENST00000389134 CABIN1Q9Y6J0 2220 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 ZNF840PA6NDX5 716 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 ARHGAP33O14559 1287 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 HCRTO43612 131 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 LDHAP00338 332 aaKnown RBP22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 SYPP08247 313 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 KRT19P08727 400 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 ADH5P11766 374 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 ANXA13P27216 316 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 WNT7BP56706 349 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 ZNF33AQ06730 810 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 SCAPQ12770 1279 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 SOWAHAQ2M3V2 549 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 DPH6Q7L8W6 267 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 TRMT11Q7Z4G4 463 aaKnown RBP22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 C12orf40Q86WS4 652 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 DDX42Q86XP3 938 aaKnown RBP eCLIP22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 KRI1Q8N9T8 703 aaKnown RBP22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 RASSF8Q8NHQ8 419 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 SYT15Q9BQS2 421 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 TTLL2Q9BWV7 592 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 IKZF4Q9H2S9 585 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 EXOC7Q9UPT5 735 aa22.82■■□□□ 1.24
CNEP1R1-201ENST00000389134 KNTC1P50748 2209 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 TRIM66O15016 1216 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 ATP2C2O75185 946 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 SEC24BO95487 1268 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 OLFM2O95897 454 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 CD59P13987 128 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 BDNFP23560 247 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 USP46P62068 366 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 SLC14A1Q13336 389 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 PREPLQ4J6C6 727 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 LARP4BQ92615 738 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 DNAAF2Q9NVR5 837 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 RBAKQ9NYW8 714 aaPredicted RBP22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 TBC1D14Q9P2M4 693 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 R3HCC1Q9Y3T6 440 aaKnown RBP22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 CELSR3Q9NYQ7 3312 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 MYH10P35580 1976 aa22.81■■□□□ 1.24
CNEP1R1-201ENST00000389134 FLNBO75369 2602 aaKnown RBP22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 HELZ2Q9BYK8 2649 aaKnown RBP22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 PPP1R37O75864 691 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 NOP14P78316 857 aaKnown RBP22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 KDSRQ06136 332 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 TRIP6Q15654 476 aaKnown RBP22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 SOWAHCQ53LP3 525 aaPredicted RBP22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 C19orf48Q6RUI8 117 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 PDZD3Q86UT5 571 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 MYLPFQ96A32 169 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 STRA6Q9BX79 667 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 SMPD4Q9NXE4 827 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 CFAP97Q9P2B7 532 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 PCDHB9Q9Y5E1 797 aa22.8■■□□□ 1.24
CNEP1R1-201ENST00000389134 TBC1D3BA6NDS4 549 aa22.79■■□□□ 1.24
CNEP1R1-201ENST00000389134 ABL1P00519 1130 aa22.79■■□□□ 1.24
CNEP1R1-201ENST00000389134 OAS1P00973 400 aaKnown RBP22.79■■□□□ 1.24
CNEP1R1-201ENST00000389134 DDIT3P35638 169 aa22.79■■□□□ 1.24
CNEP1R1-201ENST00000389134 MYO1EQ12965 1108 aa22.79■■□□□ 1.24
CNEP1R1-201ENST00000389134 SCARA3Q6AZY7 606 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms