RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 SNTG2Q9NY99 539 aa13.96□□□□□ -0.17
LCMT1-201ENST00000380962 NAALADL1Q9UQQ1 740 aa13.96□□□□□ -0.17
LCMT1-201ENST00000380962 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 EXOC1LA0A1B0GW35 172 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 TMEM120BA0PK00 339 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PIRO00625 290 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 TRIM66O15016 1216 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 DYNC1LI2O43237 492 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ZSCAN5DPP0CG00 497 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 EIF3EP60228 445 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ROR1Q01973 937 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ORC1Q13415 861 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 QPCTQ16769 361 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ZC3H12AQ5D1E8 599 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 C9orf57Q5W0N0 161 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CCDC121Q6ZUS5 278 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CYP4V2Q6ZWL3 525 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ATP11CQ8NB49 1132 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CKAP2Q8WWK9 683 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SGSM3Q96HU1 749 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PTPN18Q99952 460 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PLCD4Q9BRC7 762 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ZNF670Q9BS34 389 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 KDM4CQ9H3R0 1056 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SSU72Q9NP77 194 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 DNAJC17Q9NVM6 304 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 NKIRAS1Q9NYS0 192 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SAMD15Q9P1V8 674 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ZMYND8Q9ULU4 1186 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PRPF4O43172 522 aaKnown RBP eCLIP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SPAG6O75602 509 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 RECQL4O94761 1208 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 IFNB1P01574 187 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ZNF865P0CJ78 1059 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 GNAT1P11488 350 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 BRAFP15056 766 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 HOXC8P31273 242 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SDC4P31431 198 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 RPL22P35268 128 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PSEN2P49810 448 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CRYBB1P53674 252 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 BCAT1P54687 386 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CDH6P55285 790 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 IRX5P78411 483 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 BST2Q10589 180 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 IFT88Q13099 833 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 DPYSL3Q14195 570 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CCDC14Q49A88 953 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 KCNT1Q5JUK3 1230 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PPP1R26Q5T8A7 1209 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 DPH6Q7L8W6 267 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 TTC30AQ86WT1 665 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 CPT1BQ92523 772 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 HAUS1Q96CS2 278 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 FAF2Q96CS3 445 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 HSFY1Q96LI6 401 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PWWP2AQ96N64 755 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 ZMAT2Q96NC0 199 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 RNF157Q96PX1 679 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PEBP4Q96S96 227 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PRMT1Q99873 361 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 MRPL45Q9BRJ2 306 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 EIF2AQ9BY44 585 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 TRIM6Q9C030 488 aaPredicted RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PCSK1NQ9UHG2 260 aa13.95□□□□□ -0.18
LCMT1-201ENST00000380962 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
LCMT1-201ENST00000380962 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
LCMT1-201ENST00000380962 ADCY6O43306 1168 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 RBP3P10745 1247 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 ETS1P14921 441 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 ZFXP17010 805 aaPredicted RBP13.94□□□□□ -0.18
LCMT1-201ENST00000380962 SNX17Q15036 470 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 KLHL38Q2WGJ6 581 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 SV2CQ496J9 727 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 FBXO47Q5MNV8 452 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 SLC9A4Q6AI14 798 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 CYP4F22Q6NT55 531 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 TRABD2AQ86V40 505 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 CCDC13Q8IYE1 715 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 LRRC34Q8IZ02 419 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 DYDC1Q8WWB3 177 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 HSPH1Q92598 858 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 CENPIQ92674 756 aaPredicted RBP13.94□□□□□ -0.18
LCMT1-201ENST00000380962 OSMRQ99650 979 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 CALN1Q9BXU9 219 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
LCMT1-201ENST00000380962 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
LCMT1-201ENST00000380962 PAK5Q9P286 719 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 PSMC3IPQ9P2W1 217 aaPredicted RBP13.94□□□□□ -0.18
LCMT1-201ENST00000380962 GTF2IRD1Q9UHL9 959 aa13.94□□□□□ -0.18
LCMT1-201ENST00000380962 CHADO15335 359 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms