RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 KCNA4P22459 653 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 LIG3P49916 1009 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 SLC6A3Q01959 620 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 SNX17Q15036 470 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 PDK2Q15119 407 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 GKAP1Q5VSY0 366 aaPredicted RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 PPIL6Q8IXY8 311 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 OTUD6BQ8N6M0 293 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 PWWP2AQ96N64 755 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 PIN4Q9Y237 131 aaKnown RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 ACTL7BQ9Y614 415 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 MANSC4A6NHS7 340 aaPredicted RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 A8MXQ7 604 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 ETS1P14921 441 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 SDC4P31431 198 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 CDH6P55285 790 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 NR1H3Q13133 447 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 OLFML2BQ68BL8 750 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 VSIG1Q86XK7 387 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 TBCBQ99426 244 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 NXF3Q9H4D5 531 aaKnown RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 ALOX15BO15296 676 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 MYL3P08590 195 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 CRYBB1P53674 252 aaPredicted RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 PMF1Q6P1K2 205 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 GIMAP7Q8NHV1 300 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 TEKT4Q8WW24 435 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 USP6NLQ92738 828 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 C18orf25Q96B23 403 aaPredicted RBP13.2□□□□□ -0.3
VPS16-202ENST00000380445 CYLDQ9NQC7 956 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS16-202ENST00000380445 HES2Q9Y543 173 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 C17orf102A2RUQ5 167 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 PIRO00625 290 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 CD48P09326 243 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 KCNE1P15382 129 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 RGS2P41220 211 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 RGS7P49802 495 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 HUNKP57058 714 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 SOWAHAQ2M3V2 549 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 CCDC38Q502W7 563 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 GLRA4Q5JXX5 417 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 OLFML1Q6UWY5 402 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 TTC30AQ86WT1 665 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 PRCCQ92733 491 aaPredicted RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 P3H4Q92791 437 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 SMIM28A0A1B0GU29 152 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 EXOC1LA0A1B0GW35 172 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 PPEF2O14830 753 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 RBP3P10745 1247 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 SCNN1AP37088 669 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 ARL4CP56559 192 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 KRT81Q14533 505 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 HIF1AQ16665 826 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 XKR4Q5GH76 650 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 FBXW10Q5XX13 1052 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 CRYBG2Q8N1P7 616 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 DYDC1Q8WWB3 177 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 CABS1Q96KC9 395 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 ZNF317Q96PQ6 595 aaPredicted RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 APOL6Q9BWW8 343 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 FAM49BQ9NUQ9 324 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
VPS16-202ENST00000380445 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
VPS16-202ENST00000380445 PIK3R2O00459 728 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 TREHO43280 583 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 AKAP5P24588 427 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 GNL1P36915 607 aaPredicted RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 ACADSBP45954 432 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 TAF6P49848 677 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 BCAT1P54687 386 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 CDO1Q16878 200 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 SV2CQ496J9 727 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 CCDC14Q49A88 953 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 ARCQ7LC44 396 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 TDRPQ86YL5 185 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms