RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
PRPF18-202ENST00000378572 AKAP3O75969 853 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 TNNC2P02585 160 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 CKMP06732 381 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 CYP2F1P24903 491 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
PRPF18-202ENST00000378572 MYO1EQ12965 1108 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 TRIM59Q8IWR1 403 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 GPD1LQ8N335 351 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 XXYLT1Q8NBI6 393 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 EEF2KMTQ96G04 330 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 TDP1Q9NUW8 608 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 INTS13Q9NVM9 706 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 TAB2Q9NYJ8 693 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 HSPBP1Q9NZL4 362 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 GTF3C4Q9UKN8 822 aa14.64□□□□□ -0.07
PRPF18-202ENST00000378572 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.64□□□□□ -0.07
PRPF18-202ENST00000378572 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 RETP07949 1114 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 PCSK1P29120 753 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 WEE1P30291 646 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 AMPD2Q01433 879 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 ENPEPQ07075 957 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 RUNX3Q13761 415 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 WDR44Q5JSH3 913 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 USP13Q92995 863 aaPredicted RBP14.63□□□□□ -0.07
PRPF18-202ENST00000378572 ACBD6Q9BR61 282 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 ARMCX3Q9UH62 379 aaPredicted RBP14.63□□□□□ -0.07
PRPF18-202ENST00000378572 SLC8A2Q9UPR5 921 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 FRMD4BQ9Y2L6 1034 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 TRAV19A0A0A6YYK7 116 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 K7ESF4 209 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 HRO43593 1189 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 HCRTO43612 131 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 EXOC3O60645 756 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 F11P03951 625 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 ARSAP15289 507 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 HMGA1P17096 107 aaKnown RBP14.63□□□□□ -0.07
PRPF18-202ENST00000378572 CNR2P34972 360 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 PXNP49023 591 aaPredicted RBP14.63□□□□□ -0.07
PRPF18-202ENST00000378572 CASP4P49662 377 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 CYP2J2P51589 502 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 ATXN1P54253 815 aaKnown RBP14.63□□□□□ -0.07
PRPF18-202ENST00000378572 PSMC1P62191 440 aaKnown RBP14.63□□□□□ -0.07
PRPF18-202ENST00000378572 CCINQ13939 588 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 CCDC142Q17RM4 750 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 CEP135Q66GS9 1140 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 OSTM1Q86WC4 334 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 FAM186BQ8IYM0 893 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 TOP6BLQ8N6T0 577 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 EXOC4Q96A65 974 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 VPS16Q9H269 839 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 KIAA1586Q9HCI6 787 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 ABCB6Q9NP58 842 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 C2orf42Q9NWW7 574 aa14.63□□□□□ -0.07
PRPF18-202ENST00000378572 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.62□□□□□ -0.07
PRPF18-202ENST00000378572 DCDC2BA2VCK2 349 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 PBX1P40424 430 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 IFNAR2P48551 515 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 LHX1P48742 406 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 MTF1Q14872 753 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 VWA3BQ502W6 1294 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 MIIPQ5JXC2 388 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 C4orf50Q6ZRC1 276 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 TMEM150AQ86TG1 271 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 MON1AQ86VX9 555 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 VSTM4Q8IW00 320 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 CPA6Q8N4T0 437 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 HPDLQ96IR7 371 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 SYT15Q9BQS2 421 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 RTKNQ9BST9 563 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 HPS4Q9NQG7 708 aa14.62□□□□□ -0.07
PRPF18-202ENST00000378572 A0A1W2PQC6 194 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 ZNF233A6NK53 670 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 ATG13O75143 517 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 PAPSS2O95340 614 aaPredicted RBP14.61□□□□□ -0.07
PRPF18-202ENST00000378572 USP17L7P0C7H9 530 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 ANXA13P27216 316 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 CYP27A1Q02318 531 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 PDGFRLQ15198 375 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 INTS8Q75QN2 995 aaKnown RBP14.61□□□□□ -0.07
PRPF18-202ENST00000378572 MYLPFQ96A32 169 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 MMS19Q96T76 1030 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 NDST4Q9H3R1 872 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 SEMA4GQ9NTN9 838 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 DUS2Q9NX74 493 aaKnown RBP14.61□□□□□ -0.07
PRPF18-202ENST00000378572 SIX4Q9UIU6 781 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRPF18-202ENST00000378572 OBSL1O75147 1896 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 ITIH6Q6UXX5 1313 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 TEX33O43247 280 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 RNF40O75150 1001 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 NOL4O94818 638 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 DLATP10515 647 aaKnown RBP14.61□□□□□ -0.07
PRPF18-202ENST00000378572 HOXC13P31276 330 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 SURF1Q15526 300 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 SCARA3Q6AZY7 606 aa14.61□□□□□ -0.07
PRPF18-202ENST00000378572 FSTL4Q6MZW2 842 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms