RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MTF1Q14872 753 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 PDGFRLQ15198 375 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 ZNF77Q15935 545 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 FOXR2Q6PJQ5 311 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 ZC3H14Q6PJT7 736 aaKnown RBP17.84■□□□□ 0.45
HMGN4-201ENST00000377575 PAQR9Q6ZVX9 377 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 ARL14EPQ8N8R7 260 aaPredicted RBP17.84■□□□□ 0.45
HMGN4-201ENST00000377575 NELFBQ8WX92 580 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 FBXO32Q969P5 355 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 SLC22A12Q96S37 553 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 FAM124BQ9H5Z6 455 aaPredicted RBP17.84■□□□□ 0.45
HMGN4-201ENST00000377575 FAM49BQ9NUQ9 324 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 COMMD8Q9NX08 183 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 GCNT4Q9P109 453 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 ARHGAP26Q9UNA1 814 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 CTNND2Q9UQB3 1225 aa17.84■□□□□ 0.45
HMGN4-201ENST00000377575 ZNF840PA6NDX5 716 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 BIN1O00499 593 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 ABL1P00519 1130 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 FAM200BP0CF97 657 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 TCF3P15923 654 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 SOX9P48436 509 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 TNK2Q07912 1038 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 CCDC40Q4G0X9 1142 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 CBWD6Q4V339 395 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 FRMD5Q7Z6J6 570 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 ZNF687Q8N1G0 1237 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 TRIML1Q8N9V2 468 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 TTC8Q8TAM2 541 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 SEMA4DQ92854 862 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 SLC35C1Q96A29 364 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 CYP2S1Q96SQ9 504 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 KCNK16Q96T55 309 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 FAM83CQ9BQN1 747 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 CHRDQ9H2X0 955 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 GKN1Q9NS71 199 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 USP34Q70CQ2 3546 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 VPS13AQ96RL7 3174 aa17.83■□□□□ 0.44
HMGN4-201ENST00000377575 PPP1R3GB7ZBB8 358 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 BMP6P22004 513 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 ADORA2BP29275 332 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 IFNAR2P48551 515 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 AMPD2Q01433 879 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 PAK1Q13153 545 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 RUNX3Q13761 415 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 TTI2Q6NXR4 508 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 FILIP1Q7Z7B0 1213 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 CPA6Q8N4T0 437 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 C12orf29Q8N999 325 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 TTC16Q8NEE8 873 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 SH3RF2Q8TEC5 729 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 OSCP1Q8WVF1 389 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 ATP2A3Q93084 1043 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 TWNKQ96RR1 684 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 HNRNPABQ99729 332 aaKnown RBP17.82■□□□□ 0.44
HMGN4-201ENST00000377575 FBXO44Q9H4M3 255 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 EBF3Q9H4W6 596 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 CSNK1G1Q9HCP0 422 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 HPS4Q9NQG7 708 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 FBXO4Q9UKT5 387 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 COQ4Q9Y3A0 265 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 DMDP11532 3685 aa17.82■□□□□ 0.44
HMGN4-201ENST00000377575 TNFRSF10BO14763 440 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 OLFM2O95897 454 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 OAS1P00973 400 aaKnown RBP17.81■□□□□ 0.44
HMGN4-201ENST00000377575 SP9P0CG40 484 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 MAP3K7CLP57077 242 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 SLC7A9P82251 487 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 FZD5Q13467 585 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 PPP2R5DQ14738 602 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 ZNF528Q3MIS6 628 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 TRIM68Q6AZZ1 485 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 RIN3Q8TB24 985 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 EXOC4Q96A65 974 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 CYFIP2Q96F07 1278 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 SMOQ99835 787 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 DUSP9Q99956 384 aaKnown RBP17.81■□□□□ 0.44
HMGN4-201ENST00000377575 LMAN1LQ9HAT1 526 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 CISHQ9NSE2 258 aa17.81■□□□□ 0.44
HMGN4-201ENST00000377575 DUS2Q9NX74 493 aaKnown RBP17.81■□□□□ 0.44
HMGN4-201ENST00000377575 GFRA3O60609 400 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 GNA14O95837 355 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 CHRNB1P11230 501 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 TUBP50607 506 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 YWHAEP62258 255 aaKnown RBP17.8■□□□□ 0.44
HMGN4-201ENST00000377575 CETN1Q12798 172 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 MTAPQ13126 283 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 PON2Q15165 354 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 DGKKQ5KSL6 1271 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 TXNDC11Q6PKC3 985 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 DDX42Q86XP3 938 aaKnown RBP eCLIP17.8■□□□□ 0.44
HMGN4-201ENST00000377575 KIAA1958Q8N8K9 716 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 ZMIZ2Q8NF64 920 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 WHAMMQ8TF30 809 aa17.8■□□□□ 0.44
HMGN4-201ENST00000377575 NKD2Q969F2 451 aaPredicted RBP17.8■□□□□ 0.44
HMGN4-201ENST00000377575 PNPLA8Q9NP80 782 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms