RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 CABYRO75952 493 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 CD48P09326 243 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 FAM163BP0C2L3 166 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 KLRC2P26717 231 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 RPL34P49207 117 aaKnown RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 LMAN1P49257 510 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 VPS41P49754 854 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 SCNN1GP51170 649 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 AFF1P51825 1210 aaKnown RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 VCPP55072 806 aaKnown RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 ITGA7Q13683 1181 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 TAF5Q15542 800 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 CDO1Q16878 200 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 TRIM71Q2Q1W2 868 aaKnown RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 CCDC14Q49A88 953 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 RAB6CQ53S08 254 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 BBS12Q6ZW61 710 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 ZNF771Q7L3S4 317 aaPredicted RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 CMASQ8NFW8 434 aaPredicted RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 KHSRPQ92945 711 aaKnown RBP eCLIP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 ATP6V1G3Q96LB4 118 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 RAB6CQ9H0N0 254 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 PABPC3Q9H361 631 aaKnown RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 TRMT13Q9NUP7 481 aaKnown RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 MIOSQ9NXC5 875 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 NOD1Q9Y239 953 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.62■□□□□ 0.41
HLA-A-202ENST00000376806 PTCH2Q9Y6C5 1203 aa17.62■□□□□ 0.41
HLA-A-202ENST00000376806 SDC4P31431 198 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 ADCY8P40145 1251 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 ACLYP53396 1101 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 ITGA8P53708 1063 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 CAV1Q03135 178 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 DSC3Q14574 896 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 LPIN1Q14693 890 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 OASLQ15646 514 aaKnown RBP17.61■□□□□ 0.41
HLA-A-202ENST00000376806 WSCD1Q658N2 575 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 KCTD16Q68DU8 428 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 GSTA5Q7RTV2 222 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 SCUBE3Q8IX30 993 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 SH2D3CQ8N5H7 860 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 KCTD6Q8NC69 237 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 NKD2Q969F2 451 aaPredicted RBP17.61■□□□□ 0.41
HLA-A-202ENST00000376806 CFAP57Q96MR6 1250 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 TRAIPQ9BWF2 469 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 B3GNT5Q9BYG0 378 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 PRPSAP2O60256 369 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 NUDT17P0C025 328 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 MYZAPP0CAP1 466 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 IGFBP6P24592 240 aaPredicted RBP17.61■□□□□ 0.41
HLA-A-202ENST00000376806 SCNN1AP37088 669 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 ACADSBP45954 432 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 CLCNKBP51801 687 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 DYNLT1P63172 113 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 DENND2CQ68D51 928 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 SLC26A9Q7LBE3 791 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 ALLCQ8N6M5 410 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 CLEC4CQ8WTT0 213 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 SENP8Q96LD8 212 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 HNRNPABQ99729 332 aaKnown RBP17.61■□□□□ 0.41
HLA-A-202ENST00000376806 ZNF148Q9UQR1 794 aa17.61■□□□□ 0.41
HLA-A-202ENST00000376806 DRG1Q9Y295 367 aaKnown RBP17.61■□□□□ 0.41
HLA-A-202ENST00000376806 HMGB1P1B2RPK0 211 aaPredicted RBP17.6■□□□□ 0.41
HLA-A-202ENST00000376806 GABRDO14764 452 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 CST8O60676 142 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 ZNF623O75123 536 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 ATP2C2O75185 946 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 CAPN15O75808 1086 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 RARGP13631 454 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 LCP1P13796 627 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 ACAT1P24752 427 aaKnown RBP17.6■□□□□ 0.41
HLA-A-202ENST00000376806 EIF3BP55884 814 aaKnown RBP17.6■□□□□ 0.41
HLA-A-202ENST00000376806 ATP11AP98196 1134 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 CCDC142Q17RM4 750 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 FAM26DQ5JW98 314 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 RFX6Q8HWS3 928 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 TTC13Q8NBP0 860 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 BBOF1Q8ND07 529 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 SLC35B2Q8TB61 432 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 CCHCR1Q8TD31 782 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 FAM172AQ8WUF8 416 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 HSFY1Q96LI6 401 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 FRMD8P1Q9BZ68 369 aaPredicted RBP17.6■□□□□ 0.41
HLA-A-202ENST00000376806 NGRNQ9NPE2 291 aaKnown RBP17.6■□□□□ 0.41
HLA-A-202ENST00000376806 AAASQ9NRG9 546 aa17.6■□□□□ 0.41
HLA-A-202ENST00000376806 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.6■□□□□ 0.41
HLA-A-202ENST00000376806 XPO1O14980 1071 aaKnown RBP17.59■□□□□ 0.41
HLA-A-202ENST00000376806 ITGAVP06756 1048 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 DESP17661 470 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 PTPN1P18031 435 aaKnown RBP17.59■□□□□ 0.41
HLA-A-202ENST00000376806 OTUD4Q01804 1114 aaKnown RBP17.59■□□□□ 0.41
HLA-A-202ENST00000376806 ARHGEF6Q15052 776 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 IZUMO3Q5VZ72 239 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 PRUNE1Q86TP1 453 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 CCDC25Q86WR0 208 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 FUKQ8N0W3 1084 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 TMEM86AQ8N2M4 240 aa17.59■□□□□ 0.41
HLA-A-202ENST00000376806 C3orf58Q8NDZ4 430 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms