RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 EMID1Q96A84 441 aaPredicted RBP12.18□□□□□ -0.46
DDR1-227ENST00000376570 SGSM3Q96HU1 749 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 FERMT1Q9BQL6 677 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
DDR1-227ENST00000376570 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
DDR1-227ENST00000376570 NCANO14594 1321 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 RPTORQ8N122 1335 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 TCRBV7S3A2A0A539 114 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 CDH16O75309 829 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 ENDOD1O94919 500 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
DDR1-227ENST00000376570 LMNB2Q03252 620 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 PTK7Q13308 1070 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 C4orf50Q6ZRC1 276 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 WDR49Q8IV35 697 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 ACTR5Q9H9F9 607 aaPredicted RBP12.18□□□□□ -0.46
DDR1-227ENST00000376570 NOD2Q9HC29 1040 aa12.18□□□□□ -0.46
DDR1-227ENST00000376570 CNTRLQ7Z7A1 2325 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 IGF2BP3O00425 579 aaKnown RBP eCLIP12.17□□□□□ -0.463e-6■□□□□ 10.4
DDR1-227ENST00000376570 DNM1LO00429 736 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 CFLARO15519 480 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 MAFO75444 373 aaPredicted RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 CBX6O95503 412 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 IQCF3P0C7M6 154 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 TROVE2P10155 538 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDR1-227ENST00000376570 RPA3P35244 121 aaPredicted RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 EPHB1P54762 984 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 ZNF280AP59817 542 aaPredicted RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 FOXD4Q12950 439 aaPredicted RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 TAF11Q15544 211 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 PDCD6IPQ8WUM4 868 aaKnown RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 ERLEC1Q96DZ1 483 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 SLITRK1Q96PX8 696 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 LGMNQ99538 433 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 MECRQ9BV79 373 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 PAPPAQ13219 1627 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 TXNDC9O14530 226 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 APOL1O14791 398 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 ATXN8OSP0DMR3 200 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 TFE3P19532 575 aaPredicted RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 AVPR1AP37288 418 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 CFAP61Q8NHU2 1237 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 SH3GL2Q99962 352 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 RHOBTB2Q9BYZ6 727 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 STRIP2Q9ULQ0 834 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 A8MUI8 341 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 TREHO43280 583 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 AGTP01019 485 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 PYGBP11216 843 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 THPOP40225 353 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 PTGIRP43119 386 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 GLRBP48167 497 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 ALDH18A1P54886 795 aaKnown RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 ACCSLQ4AC99 568 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 UNC5BQ8IZJ1 945 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 EFCAB3Q8N7B9 438 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 APPL2Q8NEU8 664 aa12.17□□□□□ -0.46
DDR1-227ENST00000376570 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
DDR1-227ENST00000376570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.469e-7■■■■□ 21.1
DDR1-227ENST00000376570 TOP3BO95985 862 aaKnown RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 RPL22P35268 128 aaKnown RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 ETFBP38117 255 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 FNTAP49354 379 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 NDUFV1P49821 464 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 DGKDQ16760 1214 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SPRED3Q2MJR0 410 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 LRIG3Q6UXM1 1119 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 TRPM8Q7Z2W7 1104 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 BBOF1Q8ND07 529 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 RDM1Q8NG50 284 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 MFHAS1Q9Y4C4 1052 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 FZD9O00144 591 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SLC25A27O95847 323 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 POU5F1BQ06416 359 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 CA9Q16790 459 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 WSCD1Q658N2 575 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 PMF1Q6P1K2 205 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 XRRA1Q6P2D8 792 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SLFN11Q7Z7L1 901 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 MIB1Q86YT6 1006 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 PAFAH2Q99487 392 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 SUDS3Q9H7L9 328 aaPredicted RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 DDIT4Q9NX09 232 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 BUD23O43709 281 aaKnown RBP12.16□□□□□ -0.46
DDR1-227ENST00000376570 BGNP21810 368 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 ARL2P36404 184 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 GRIA1P42261 906 aa12.16□□□□□ -0.46
DDR1-227ENST00000376570 CXCR3P49682 368 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms