RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 WNT10BO00744 389 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 P4HA2O15460 535 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 HCRTO43612 131 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ENTPD3O75355 529 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PDGFRAP16234 1089 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 NCKAP1LP55160 1127 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 KLF1Q13351 362 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RALGPS1Q5JS13 557 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 C6orf163Q5TEZ5 329 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 C4orf19Q8IY42 314 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 NME8Q8N427 588 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 FAM151AQ8WW52 585 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 NRG4Q8WWG1 115 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 CPB2Q96IY4 423 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 COL24A1Q17RW2 1714 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 CCDC189A1A4V9 331 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RGL2O15211 777 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PSTPIP1O43586 416 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 CCDC22O60826 627 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 DGAT1O75907 488 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 LUC7L3O95232 432 aaKnown RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RBL1P28749 1068 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 JAK3P52333 1124 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ROR1Q01973 937 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RNASEH2BQ5TBB1 312 aaKnown RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 LRRC74BQ6ZQY2 392 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ZBTB46Q86UZ6 589 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF483Q8TF39 744 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 DEPDC1BQ8WUY9 529 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 B3GNT5Q9BYG0 378 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 LRMDAQ9H2I8 198 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 SMG5Q9UPR3 1016 aaKnown RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PGM3O95394 542 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 MT-CO1P00395 513 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ITGB3P05106 788 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PDGFRBP09619 1106 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 SLC8A3P57103 927 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 GCNT1Q02742 428 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 LMNB2Q03252 620 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RABGAP1LQ5R372 815 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 RSBN1LQ6PCB5 846 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 C4orf50Q6ZRC1 276 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 SCUBE3Q8IX30 993 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PPIL6Q8IXY8 311 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 KATNAL2Q8IYT4 538 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 SNX31Q8N9S9 440 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 C7orf43Q8WVR3 580 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 DHX35Q9H5Z1 703 aaKnown RBP12.3□□□□□ -0.44
MCF2L-202ENST00000375597 ZNF358Q9NW07 568 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
MCF2L-202ENST00000375597 GSC2O15499 205 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 LRCH4O75427 683 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 SKIP12755 728 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 HOXA7P31268 230 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 BLMHQ13867 455 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 TNS4Q8IZW8 715 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 MPP5Q8N3R9 675 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 C12orf50Q8NA57 414 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 COPS5Q92905 334 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 TWNKQ96RR1 684 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 E9PBE3 544 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 KLHL41O60662 606 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 HMGCRP04035 888 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 CDKN2BP42772 138 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 RIPK1Q13546 671 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 MOGSQ13724 837 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 EEF1DP3Q658K8 133 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 MTBPQ96DY7 904 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 OXNAD1Q96HP4 312 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-202ENST00000375597 MFSD14AQ96MC6 490 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 SBF2Q86WG5 1849 aa12.29□□□□□ -0.44
MCF2L-202ENST00000375597 A0A0B4J269 797 aa12.28□□□□□ -0.44
MCF2L-202ENST00000375597 TMEM191CA6NGB0 347 aa12.28□□□□□ -0.44
MCF2L-202ENST00000375597 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
MCF2L-202ENST00000375597 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
MCF2L-202ENST00000375597 BCAR1P56945 870 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms