RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 UBP1Q9NZI7 540 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 PAK5Q9P286 719 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 SPDYE5A6NIY4 337 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 HMGCRP04035 888 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 CD48P09326 243 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 AMPD1P23109 780 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 KDELR1P24390 212 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 STILQ15468 1287 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 TAF5Q15542 800 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 MON1BQ7L1V2 547 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 TAS1R3Q7RTX0 852 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 PHF13Q86YI8 300 aaPredicted RBP14.12□□□□□ -0.15
CLIC4-201ENST00000374379 ADGRF2Q8IZF7 708 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 EXT2Q93063 718 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 TINF2Q9BSI4 451 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 NXF3Q9H4D5 531 aaKnown RBP14.12□□□□□ -0.15
CLIC4-201ENST00000374379 AP4E1Q9UPM8 1137 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 TMEM191CA6NGB0 347 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 TRAPPC3O43617 180 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 AP1G2O75843 785 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 POMCP01189 267 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 PEX5P50542 639 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 ADIGQ0VDE8 80 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 ARMC2Q8NEN0 867 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 BFARQ9NZS9 450 aa14.12□□□□□ -0.15
CLIC4-201ENST00000374379 KCNK1O00180 336 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 EEF2KO00418 725 aaKnown RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 TXNDC9O14530 226 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 LIASO43766 372 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 RBL1P28749 1068 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 GRIK1P39086 918 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 RNF135Q8IUD6 432 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 NDUFAF2Q8N183 169 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SGSM3Q96HU1 749 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 C12orf42Q96LP6 360 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 NIFKQ9BYG3 293 aaKnown RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.11□□□□□ -0.157e-9■■■■■ 34.7
CLIC4-201ENST00000374379 HMGXB4Q9UGU5 601 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 DOCK2Q92608 1830 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SMCHD1A6NHR9 2005 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 KAT6AQ92794 2004 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 C17orf102A2RUQ5 167 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 EPHB2P29323 1055 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 CPA2P48052 419 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 FASTKD3Q14CZ7 662 aaKnown RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 MORF4L2Q15014 288 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 MUM1Q2TAK8 710 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 FAM183BPQ6ZVS7 135 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 PLPPR4Q7Z2D5 763 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 EXOC3L1Q86VI1 746 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 NDRG1Q92597 394 aaKnown RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 PLEKHA5Q9HAU0 1116 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SLC40A1Q9NP59 571 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 NUDT5Q9UKK9 219 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 UBOX5O94941 541 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 FAM200BP0CF97 657 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 UNGP13051 313 aaPredicted RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 TSPY1Q01534 308 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 DCAF4L1Q3SXM0 396 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 CRLF3Q8IUI8 442 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 ART4Q93070 314 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SH3GL2Q99962 352 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 LPIN3Q9BQK8 851 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 CYP3A43Q9HB55 503 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 PCDH9Q9HC56 1237 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 BCORQ6W2J9 1755 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SV2CQ496J9 727 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 CES3Q6UWW8 571 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 CD302Q8IX05 232 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 PARP9Q8IXQ6 854 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
CLIC4-201ENST00000374379 VTA1Q9NP79 307 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 FAM53CQ9NYF3 392 aa14.11□□□□□ -0.15
CLIC4-201ENST00000374379 SIGLEC16A6NMB1 481 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 GYG2O15488 501 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 MSCO60682 206 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 AVILO75366 819 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 CRCPO75575 148 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 ERBB2P04626 1255 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 CYP2F1P24903 491 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 STIP1P31948 543 aaKnown RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 ZNF268Q14587 947 aaPredicted RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 PPP1R26Q5T8A7 1209 aaPredicted RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 KIAA1841Q6NSI8 718 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 GPR142Q7Z601 462 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 GBP7Q8N8V2 638 aaPredicted RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 PGM2Q96G03 612 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 CPSF3Q9UKF6 684 aaKnown RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 SMG5Q9UPR3 1016 aaKnown RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.1□□□□□ -0.15
CLIC4-201ENST00000374379 KBTBD13C9JR72 458 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 USP12O75317 370 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 DCTN3O75935 186 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 HAUS5O94927 633 aa14.1□□□□□ -0.15
CLIC4-201ENST00000374379 TARSP26639 723 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms