RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 MEIS2O14770 477 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 NBPF12Q5TAG4 269 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 LNX1Q8TBB1 728 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ASAP3Q8TDY4 903 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SNX19Q92543 992 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 FAM84AQ96KN4 292 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 INPP4AQ96PE3 977 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 TMEM120AQ9BXJ8 343 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 EML4Q9HC35 981 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 CHCHD3Q9NX63 227 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 TJP2Q9UDY2 1190 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 DNAJC16Q9Y2G8 782 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 NID2Q14112 1375 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 F8VP50 259 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ZNF263O14978 683 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 FLOT2Q14254 428 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 KIZQ2M2Z5 673 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 EFHBQ8N7U6 833 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 NAF1Q96HR8 494 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 CEP19Q96LK0 163 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 VPS33BQ9H267 617 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 KCNMB3Q9NPA1 279 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PAPOLBQ9NRJ5 636 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SLC24A2Q9UI40 661 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 V9GYQ6 96 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PKD1L3Q7Z443 1732 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 CD4P01730 458 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SERPINB5P36952 375 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ECM1Q16610 540 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 NFIL3Q16649 462 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 C4orf32Q8N8J7 132 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 TNFRSF25Q93038 417 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 DNALI1O14645 258 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 SNUPNO95149 360 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 VTNP04004 478 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 STAG3L1P0CL83 205 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 VDRP11473 427 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ACADSBP45954 432 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 GCNT1Q02742 428 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PGM5Q15124 567 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 RBBP7Q16576 425 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PRELID2Q8N945 189 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PWWP2AQ96N64 755 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ILKAPQ9H0C8 392 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
CSMD2-204ENST00000373380 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 PCDHAC2Q9Y5I4 1007 aa11.28□□□□□ -0.6
CSMD2-204ENST00000373380 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.6
CSMD2-204ENST00000373380 RECQLP46063 649 aaPredicted RBP11.27□□□□□ -0.6
CSMD2-204ENST00000373380 CYLC2Q14093 348 aaPredicted RBP11.27□□□□□ -0.6
CSMD2-204ENST00000373380 POTEAQ6S8J7 498 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 IRF2BP2Q7Z5L9 587 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 PRUNE1Q86TP1 453 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 CATSPER1Q8NEC5 780 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 ZNF518BQ9C0D4 1074 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 ARMCX1Q9P291 453 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 CDYLQ9Y232 598 aa11.27□□□□□ -0.6
CSMD2-204ENST00000373380 ASTN1O14525 1302 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 SDR42E2A6NKP2 422 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 ADRA1DP25100 572 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 AVPR1AP37288 418 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 DCAF4L1Q3SXM0 396 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 ACCSLQ4AC99 568 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 FAM136AQ96C01 138 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 ZCWPW1Q9H0M4 648 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 E9PBE3 544 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 RGL2O15211 777 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 KLHL41O60662 606 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 CYP2B6P20813 491 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 PTPN4P29074 926 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 ETFBP38117 255 aa11.27□□□□□ -0.61
CSMD2-204ENST00000373380 CXCL9Q07325 125 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms