RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CFAP57Q96MR6 1250 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 ZNF560Q96MR9 790 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 CNPY3Q9BT09 278 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 MIS12Q9H081 205 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 C10orf88Q9H8K7 445 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 DDX20Q9UHI6 824 aaKnown RBP20.79■□□□□ 0.92
LHX3-202ENST00000371748 SCN10AQ9Y5Y9 1956 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 GABBR2O75899 941 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 CYBAP13498 195 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 ADORA2BP29275 332 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 ATP11AP98196 1134 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 OTUD4Q01804 1114 aaKnown RBP20.79■□□□□ 0.92
LHX3-202ENST00000371748 NBPF20Q3BBV1 942 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 OLFML1Q6UWY5 402 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 ACTL9Q8TC94 416 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 TLCD1Q96CP7 247 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 CALN1Q9BXU9 219 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 SLC4A5Q9BY07 1137 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 B3GNT5Q9BYG0 378 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 DRG1Q9Y295 367 aaKnown RBP20.79■□□□□ 0.92
LHX3-202ENST00000371748 CDY2AQ9Y6F7 541 aa20.79■□□□□ 0.92
LHX3-202ENST00000371748 XPOTO43592 962 aaKnown RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 RASSF9O75901 435 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 GNL1P36915 607 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 TAF6P49848 677 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 PPP2R2AP63151 447 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 TAZQ16635 292 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 QPCTQ16769 361 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 HIBCHQ6NVY1 386 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 TAF2Q6P1X5 1199 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 RFX6Q8HWS3 928 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 BBOF1Q8ND07 529 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 CMASQ8NFW8 434 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 SLC35B2Q8TB61 432 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 WNT8BQ93098 351 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 ZFP42Q96MM3 310 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 MYCBPQ99417 103 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 MTG1Q9BT17 334 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 MEIS3P2A8K0S8 358 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 SGK1O00141 431 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 CTSHP09668 335 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 PCK1P35558 622 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 GJA9P57773 515 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 MRPS6P82932 125 aaKnown RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 KYNUQ16719 465 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 GDF6Q6KF10 455 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 BBS12Q6ZW61 710 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 NKD2Q969F2 451 aaPredicted RBP20.78■□□□□ 0.92
LHX3-202ENST00000371748 ADAM7Q9H2U9 754 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 GTF2IRD1Q9UHL9 959 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 EFR3BQ9Y2G0 817 aa20.78■□□□□ 0.92
LHX3-202ENST00000371748 PAPSS1O43252 624 aaPredicted RBP20.77■□□□□ 0.92
LHX3-202ENST00000371748 IFNB1P01574 187 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 ITGAVP06756 1048 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 SLC6A3Q01959 620 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 TRIM32Q13049 653 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 GPS1Q13098 491 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 CCDC14Q49A88 953 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 FAM47CQ5HY64 1035 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 ARHGAP17Q68EM7 881 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 CYP4V2Q6ZWL3 525 aaPredicted RBP20.77■□□□□ 0.92
LHX3-202ENST00000371748 TMEM110Q86TL2 294 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 APPL2Q8NEU8 664 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 SNX25Q9H3E2 840 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.77■□□□□ 0.92
LHX3-202ENST00000371748 GDAP2Q9NXN4 497 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
LHX3-202ENST00000371748 TLL2Q9Y6L7 1015 aa20.77■□□□□ 0.92
LHX3-202ENST00000371748 DNALI1O14645 258 aaPredicted RBP20.77■□□□□ 0.91
LHX3-202ENST00000371748 PTGESO14684 152 aa20.77■□□□□ 0.91
LHX3-202ENST00000371748 RGS16O15492 202 aaPredicted RBP20.77■□□□□ 0.91
LHX3-202ENST00000371748 SETSIPP0DME0 302 aa20.77■□□□□ 0.91
LHX3-202ENST00000371748 MMRN1Q13201 1228 aa20.77■□□□□ 0.91
LHX3-202ENST00000371748 SPRED3Q2MJR0 410 aa20.77■□□□□ 0.91
LHX3-202ENST00000371748 KHSRPQ92945 711 aaKnown RBP eCLIP20.77■□□□□ 0.91
LHX3-202ENST00000371748 PGM2Q96G03 612 aa20.77■□□□□ 0.91
LHX3-202ENST00000371748 OSBPL7Q9BZF2 842 aa20.77■□□□□ 0.91
LHX3-202ENST00000371748 BRCA2P51587 3418 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 M0QZ92 97 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 CA12O43570 354 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 IGFBP6P24592 240 aaPredicted RBP20.76■□□□□ 0.91
LHX3-202ENST00000371748 PNPLA4P41247 253 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 FLT3LGP49771 235 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 CDH6P55285 790 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 IFI35P80217 286 aaPredicted RBP20.76■□□□□ 0.91
LHX3-202ENST00000371748 CCHCR1Q8TD31 782 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 CLEC4CQ8WTT0 213 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 NGRNQ9NPE2 291 aaKnown RBP20.76■□□□□ 0.91
LHX3-202ENST00000371748 KLC4Q9NSK0 619 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 NINJ2Q9NZG7 142 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 CACNG4Q9UBN1 327 aa20.76■□□□□ 0.91
LHX3-202ENST00000371748 RASGRF2O14827 1237 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 TTC4O95801 387 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 MYCNP04198 464 aaPredicted RBP20.75■□□□□ 0.91
LHX3-202ENST00000371748 CDR1P51861 262 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 GDF10P55107 478 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 FCGRTP55899 365 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 LILRA4P59901 499 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 LONRF1Q17RB8 773 aa20.75■□□□□ 0.91
LHX3-202ENST00000371748 SV2CQ496J9 727 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms