RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MIB1Q86YT6 1006 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 FSIP1Q8NA03 581 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 RHBDD1Q8TEB9 315 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 KIF2CQ99661 725 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 NTPCRQ9BSD7 190 aaKnown RBP15.75■□□□□ 0.11
VAMP4-202ENST00000367740 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 ORC3Q9UBD5 711 aaPredicted RBP15.75■□□□□ 0.11
VAMP4-202ENST00000367740 A0A1B0GTW7 788 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 CAPN8A6NHC0 703 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 OR52Z1P0C646 297 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 ADH5P11766 374 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 WASP42768 502 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 TAF6P49848 677 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 TSPY1Q01534 308 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
VAMP4-202ENST00000367740 PTPRNQ16849 979 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 WDR45BQ5MNZ6 344 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 GPR155Q7Z3F1 870 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 TRMT11Q7Z4G4 463 aaKnown RBP15.74■□□□□ 0.11
VAMP4-202ENST00000367740 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 DIS3L2Q8IYB7 885 aaKnown RBP15.74■□□□□ 0.11
VAMP4-202ENST00000367740 ZCCHC9Q8N567 271 aaKnown RBP15.74■□□□□ 0.11
VAMP4-202ENST00000367740 FOXJ1Q92949 421 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 NXPE2Q96DL1 559 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 RPF1Q9H9Y2 349 aaKnown RBP15.74■□□□□ 0.11
VAMP4-202ENST00000367740 ABCB6Q9NP58 842 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 DNMT3LQ9UJW3 386 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 PCDHGB2Q9Y5G2 931 aa15.74■□□□□ 0.11
VAMP4-202ENST00000367740 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.73■□□□□ 0.11
VAMP4-202ENST00000367740 E9PMD0 336 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 NDUFS2O75306 463 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 ADH1CP00326 375 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 FDPSP14324 419 aaKnown RBP15.73■□□□□ 0.11
VAMP4-202ENST00000367740 MATKP42679 507 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 TMEM132DQ14C87 1099 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 KYAT1Q16773 422 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 RINT1Q6NUQ1 792 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 C1orf186Q6ZWK4 172 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 KIAA1958Q8N8K9 716 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 KCNV2Q8TDN2 545 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 SPIRE2Q8WWL2 714 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 DNASE2BQ8WZ79 361 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 ERLEC1Q96DZ1 483 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 FAM212AQ96EL1 285 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 PKMYT1Q99640 499 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 SLC6A17Q9H1V8 727 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
VAMP4-202ENST00000367740 CABIN1Q9Y6J0 2220 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 MYLKQ15746 1914 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 UBR5O95071 2799 aaPredicted RBP15.72■□□□□ 0.11
VAMP4-202ENST00000367740 OGTO15294 1046 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 NTSR1P30989 418 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 PDE6CP51160 858 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 SLC7A9P82251 487 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 HLA-BQ31612 363 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 DHRS13Q6UX07 377 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 ETFBKMTQ8IXQ9 262 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 IPO4Q8TEX9 1081 aaKnown RBP15.72■□□□□ 0.11
VAMP4-202ENST00000367740 WASF1Q92558 559 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 BICD1Q96G01 975 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.72■□□□□ 0.11
VAMP4-202ENST00000367740 NFE2L3Q9Y4A8 694 aa15.72■□□□□ 0.11
VAMP4-202ENST00000367740 TP53BP1Q12888 1972 aaPredicted RBP15.72■□□□□ 0.11
VAMP4-202ENST00000367740 TEX15Q9BXT5 2789 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 KNTC1P50748 2209 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 TBC1D3BA6NDS4 549 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 MEI4A8MW99 385 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 SLC9A3R1O14745 358 aaPredicted RBP15.71■□□□□ 0.11
VAMP4-202ENST00000367740 RRP8O43159 456 aaKnown RBP15.71■□□□□ 0.11
VAMP4-202ENST00000367740 TNFSF14O43557 240 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 OLFM2O95897 454 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 PLS3P13797 630 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 PFKLP17858 780 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 SEMG2Q02383 582 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 KCNC4Q03721 635 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 SRSF1Q07955 248 aaKnown RBP eCLIP15.71■□□□□ 0.11
VAMP4-202ENST00000367740 PDIA5Q14554 519 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 CCDC157Q569K6 752 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 LY6G5CQ5SRR4 150 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 C10orf76Q5T2E6 689 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 EGFLAMQ63HQ2 1017 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 CD302Q8IX05 232 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 FAM181AQ8N9Y4 354 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 TERB1Q8NA31 727 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 ACOX2Q99424 681 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 RNF38Q9H0F5 515 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 SMPD4Q9NXE4 827 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.11
VAMP4-202ENST00000367740 DERAQ9Y315 318 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 CPQQ9Y646 472 aa15.71■□□□□ 0.11
VAMP4-202ENST00000367740 KPNA7A9QM74 516 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 ERVH48-1M5A8F1 160 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 PFKFB2O60825 505 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 TULP3O75386 442 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 ACAT1P24752 427 aaKnown RBP15.7■□□□□ 0.1
VAMP4-202ENST00000367740 CDC25AP30304 524 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 RAD51AP2Q09MP3 1159 aa15.7■□□□□ 0.1
VAMP4-202ENST00000367740 CFAP221Q4G0U5 840 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms